| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3974 |
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| Symbol | |
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| ID | 5541480 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 5180220 |
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| End bp | 5181686 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640896082 |
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| Product | undecaprenyl-phosphate galactose phosphotransferase |
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| Protein accession | YP_001434025 |
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| Protein GI | 156743896 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
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| TIGRFAM ID | [TIGR03022] Undecaprenyl-phosphate galactose phosphotransferase, WbaP
[TIGR03025] exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0593846 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00174462 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCGATCT CAAAAGGAAT TGCAGCGCAC GCAAAGCCAG GACATATCGT TCGACGCGCC
GATCGCTGGC TGTTGAACGG TGTGCTGGTT ATCAATGATA CCCTGGCGGT GCTTATCAGT
TTTGCAATCG CCTATGCGGT GCGTTTCTGG AGCGACCTGC CGATTTTCGA GGAAGGGTGG
GTCAATCCTG ATTTCTATGC GATGGTTGTG CTGGCGATGA CGCCGGTGTA TCTGGGATTG
TTTGCGGCGT ATGGTCTGTA CAATCCGGTG AATCTGCTGG GTGGTGCGAC TGAATATGCC
CGGATGTTCA ATGCTGTCAC CACTGGGGTC TTACTTGTCA TCATCGTCAG TTTCCTGGTT
CCCAACTTTA TTGTTGCGCG TGGATTTCTT ATTCTGTCGT GGGGTTTGCT GGTCATCTTC
GGCATTACCG GTCGTTTTGC GGTGCGCCGA TTTGTTTACG CTCAGCGTCA GGCAGGGCGG
TTTGTCAACC ACACGCTGAT CATCGGCGCG AATCCCGAAG GATTGGCGAT TGTCGAACAA
TTACGGTCGG CAAAAACCTG TGGGATGCGC ATCGTTGGCT TCGTCGATGA CTACCTGCCG
GTGGGCAGTG AACCAATCCC GGGTGTTCCG GTGTTGAGTG CGTCTACTGC GTTTGCGGAA
CAGATCCGGC AGCACGACAT CGATACCGTG ATTGTCGCCA ATACGGCAAT GATGCGAGAG
CAACTGCTCT CGCTCTACAG CACCCTCGAT ACCTTTCAGG ACGTTGAAGT GCGCCTGGCG
TCGGGTCTGT TCGAACTCCT GACGACCGGA GTGCGCGTTC GTGAAGAAGG TTTCGTTCCC
CTGCTGGTGC TCAACAAGAC GCGAATCACC GGCGTGCATC TGATTGCCAA GACCATACTC
GATTACACTC TGGCTGCCAC AGCAGTGATC TTCCTCATTC CTTTCTTCCT TGTTGTCGCT
TATCTGATCA AGCGCGACTC GCCCGGTCCG GTCATCTACC GGCGGCGGGT TGTCGGTCAG
GGGCGTCGTG AGTTCGATGC CCTCAAACTG CGCACCATGC ACATTGATGG CGATCGGTTG
CTGACGCCGG AGCAGAAACG CGAACTCGAA GAACACGGTA AGTTGAAGGA CGATCCGCGT
GTCACGAGAA TTGGCGCATT TCTGCGTAAG TATAGCCTCG ATGAGTTGCC GCAGTTGTTC
AATGTGCTGC GCGGTGAAAT GAGCCTGATT GGTCCGCGTA TGATCACCCG CCAGGAACTT
GAAAAATTCG GCAAATGGCA GCACAACCTC TCGACAGTGA AACCCGGTCT GACCGGCTTG
TGGCAGGTGA GCGGGCGGAG CGATCTGTCA TATGAGGATC GCGTGCGTCT GGATATGCAC
TATATCCGCA ACCATACGAT CTGGCTTGAT CTCCAGATCC TGTTTCAGAC CATACCGGCA
ATATTGACCG GTCGTGGCGC CTACTGA
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| Protein sequence | MAISKGIAAH AKPGHIVRRA DRWLLNGVLV INDTLAVLIS FAIAYAVRFW SDLPIFEEGW
VNPDFYAMVV LAMTPVYLGL FAAYGLYNPV NLLGGATEYA RMFNAVTTGV LLVIIVSFLV
PNFIVARGFL ILSWGLLVIF GITGRFAVRR FVYAQRQAGR FVNHTLIIGA NPEGLAIVEQ
LRSAKTCGMR IVGFVDDYLP VGSEPIPGVP VLSASTAFAE QIRQHDIDTV IVANTAMMRE
QLLSLYSTLD TFQDVEVRLA SGLFELLTTG VRVREEGFVP LLVLNKTRIT GVHLIAKTIL
DYTLAATAVI FLIPFFLVVA YLIKRDSPGP VIYRRRVVGQ GRREFDALKL RTMHIDGDRL
LTPEQKRELE EHGKLKDDPR VTRIGAFLRK YSLDELPQLF NVLRGEMSLI GPRMITRQEL
EKFGKWQHNL STVKPGLTGL WQVSGRSDLS YEDRVRLDMH YIRNHTIWLD LQILFQTIPA
ILTGRGAY
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