| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3957 |
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| Symbol | |
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| ID | 5541463 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 5163901 |
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| End bp | 5165274 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640896065 |
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| Product | peptidase S41 |
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| Protein accession | YP_001434008 |
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| Protein GI | 156743879 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0793] Periplasmic protease |
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| TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.604883 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.196815 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGCTGG GAAACGTCCT GCTTCGACTA GGGGCTGTCG TCAGCATTGT CACGCTGACC
GGATGTGGCA TGGCGCCGGT ATCGACGGTG CGTTCCACAA CGGCGGCGAC TGATGCGCTG
CCTGCATGGA CTGAGGGAAT TGCGACATCG GGTGCGTCCA CTCCCGCAAC TGCGACAGTA
ACACCGCTCC CTTCTCCCAC GCTTGTTCCG ACGCCGATTC CAACGCTCAC TCCAACGCCT
GATGTGCCTG CGCTCGATGA ACGACTTCAG ATTTTCGATG AAGTCTGGCG CATTGTGAAC
GAAGAATATC TCTATGATGA TTTTGGCGGC ATTGACTGGG AAGGGCTGTA TCCCGACTAT
CGCGCCCGGA TTATGCGGGC GCAATCGCGC GATGAATTCT ATGCGGCGAT GATCGATATG
GTCGCCCAAC TGAACGATAA CCACTCACGC TTCGTCCCGC CCGCTTCTGT CGAAGCGGAA
GATGCAACCG CCAGTGGACA GGAGACCCGT GTCGGAATTG GTGTGAGCGT TCAACCGAAG
CCGGATGGCG GGTTTATTCA GCAGGTCTTT CCGGAAAGCC CCGCAGCGCG CGCCGGGATT
CGTCCGCGTG ATCGGATTGT GGCAGTGGAC GGACGACCGT ATGCGGTATC CGATGGTGAT
CTCCAGGGCG ACATCGGCAC GTCGGTGCGT CTGACGATTG CGCGCCCCGG CGCAAAATTG
CGCGATGTGC TGCTCACCCG TCAGGAGGTG CGCGCCAGTA TTCTGCCCTA CTATCGCCGT
TTCCCCGGCG ATATTGGATA TGTCGCTGTG CCGACGCTCT GGGTTCACGA TATGGGAGAA
CAGGTGAGCG GCGCCCTCAC CGATCTGGTG GCGGGTGGTT CGTTGCGCGG TCTGATCCTC
GATCTGCGCT CGAACCGTGG TGGTTGGGGT GAGGTGTTGT CGGGGGTGTT GAGCCATTTT
GTGCGCGGGC AGGTCGGTGT CTTTTTCGGG CGCGACTATG TGCGTCCGCT GGTCGTCAAT
CCGCCTGCCG GGCCGGATAT GCGCAATCTC AGCGCCGGTC TGGTCGTCCT GATCGATGAA
GAGACTGCTT CCTACGCCGA GGTGCTGGCA GCGGTGTTGC AGGCAGAAGC GGGGGCGATC
GTCGTCGGGG CGCGATCGGC AGGGAATACG GAAACGATCT ATGCTCACGC GCTGCGCGAT
GGGTCGCGCC TCTGGCTCGC GCAGGAAGGG TTTCGGTTGC GCAATGGCAC AGACCTGGAA
GGGCGCGGCG TCATTCCCGA TGTGTTGCTC GAAGTCGATT GGACGCGCTA TAGCGAAGAT
GATGATCCCC AACTGCTTGA GGCGCTGCGG TTGCTTGGTG GAGGACCAAA GTGA
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| Protein sequence | MVLGNVLLRL GAVVSIVTLT GCGMAPVSTV RSTTAATDAL PAWTEGIATS GASTPATATV
TPLPSPTLVP TPIPTLTPTP DVPALDERLQ IFDEVWRIVN EEYLYDDFGG IDWEGLYPDY
RARIMRAQSR DEFYAAMIDM VAQLNDNHSR FVPPASVEAE DATASGQETR VGIGVSVQPK
PDGGFIQQVF PESPAARAGI RPRDRIVAVD GRPYAVSDGD LQGDIGTSVR LTIARPGAKL
RDVLLTRQEV RASILPYYRR FPGDIGYVAV PTLWVHDMGE QVSGALTDLV AGGSLRGLIL
DLRSNRGGWG EVLSGVLSHF VRGQVGVFFG RDYVRPLVVN PPAGPDMRNL SAGLVVLIDE
ETASYAEVLA AVLQAEAGAI VVGARSAGNT ETIYAHALRD GSRLWLAQEG FRLRNGTDLE
GRGVIPDVLL EVDWTRYSED DDPQLLEALR LLGGGPK
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