| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3954 |
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| Symbol | |
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| ID | 5541460 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 5159493 |
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| End bp | 5160596 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640896062 |
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| Product | CaCA family Na(+)/Ca(+) antiporter |
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| Protein accession | YP_001434005 |
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| Protein GI | 156743876 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0530] Ca2+/Na+ antiporter |
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| TIGRFAM ID | [TIGR00367] K+-dependent Na+/Ca+ exchanger related-protein
[TIGR00378] calcium/proton exchanger (cax) |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.575902 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.288206 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACATCA TTACCATCGT GCTCTTTGTC CTTGGGCTGG CGCTCTTGAT CGTCGGCGCA
GAAGGATTGG TGCGCGGCGC ATCGCGGATG GCGCTGGGAT TGGGGGTATC GCCACTGGTT
GTCGGATTGA CCGTCGTCGC TTTCGGCACC AGTGCACCTG AGCTGGCAGT CAGCATTCAA
TCGGCGCTCG CCGGTCCGAA TGGCGCAGAC GTGGCGCTGG GAAACGTTGT TGGCAGCAAC
ATCGCCAATG TGCTGCTCAT TCTGGGCATT TCGGCGGTCA TTACACCGCT CGTCGTGCAG
CAGCAACTCA TCCGTCTCGA CGTGCCATTG ATGATCGGCG TATCGGCGCT GGTGTTCATC
ATGGCGATGG ACGGCGTCAT CAACCGAATC GATGGGCTTA TTCTGTTCAG CGGGATTGTG
ATCTATACCG TCTTTGCGAT TCGCCAGAGT CGTAAAGAGT CTGCCGAAGT GCAGCAAGAG
TACCGTTCAG AATTCGACAC CGGTAAGCCA CAATCGGTCG GTGATTGGAT CAAGAATATA
CTGCTGCTTA TTGGGGGGCT TGCGTTGCTG GTGCTCGGCG CACGCTGGCT GGTCGACGGG
GCGATCAGTG TTGCACGGGC ATTTGGCATC AGCGAACTGG TGATCGGACT GACGATTGTC
GCGGTTGGAA CGTCGCTGCC GGAGATCGCC ACCTCAATTA TCGCAGCACT GCGCGGCGAA
CGTGATATTG CGGTTGGGAA CGTCGTGGGC AGCAACATTT TTAACCTTCT GTCCGTCCTT
GGTCTGAGCA GCATTGTGGC GCCGGTAGGC GTGAATGTCG CACCAGCGGC GCTCAACTTC
GATCTGCCGG TCATGCTTGC AGTTGCCGTC GCGTGTCTGC CGATCTTCTT CACCGGCAGA
CTGATTGCGC GCTGGGAGGG ATGGTTGTTC CTGGGGTACT ATATCGCATA TACGCTCTAT
CTCATTCTGG CGGCGACGCA GCATGAAGCC CTGCCCGCGT TCAGCACGGT GATGGGATTG
TTTGTGCTGC CCTTGACGGC TTTGACGCTG CTTTTTCTGG CATGGCGCGC GTTTCACGCG
GAACGGCGCA CGGTTGCATC GTGA
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| Protein sequence | MDIITIVLFV LGLALLIVGA EGLVRGASRM ALGLGVSPLV VGLTVVAFGT SAPELAVSIQ
SALAGPNGAD VALGNVVGSN IANVLLILGI SAVITPLVVQ QQLIRLDVPL MIGVSALVFI
MAMDGVINRI DGLILFSGIV IYTVFAIRQS RKESAEVQQE YRSEFDTGKP QSVGDWIKNI
LLLIGGLALL VLGARWLVDG AISVARAFGI SELVIGLTIV AVGTSLPEIA TSIIAALRGE
RDIAVGNVVG SNIFNLLSVL GLSSIVAPVG VNVAPAALNF DLPVMLAVAV ACLPIFFTGR
LIARWEGWLF LGYYIAYTLY LILAATQHEA LPAFSTVMGL FVLPLTALTL LFLAWRAFHA
ERRTVAS
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