Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_3945 |
Symbol | |
ID | 5541451 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 5152230 |
End bp | 5152508 |
Gene Length | 279 bp |
Protein Length | 92 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640896053 |
Product | AsnC family transcriptional regulator |
Protein accession | YP_001433996 |
Protein GI | 156743867 |
COG category | [K] Transcription |
COG ID | [COG1522] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.292927 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCACCG CTTTCGTGCT CATTCAGGCT GAACCGGCAA AGATCGCGCA GATCGCGCAG ACAGTCGCCA ACCTGCCGAA TGTTGCGGAG GTCTACAGTG TCACCGGCGA CTTCGACATC ATTGCGGTGC TTCGATTGGC GGAGTACGAG CAACTTGCCG AGGTTGTGCC GGAAAGCCTG GCGCGGATCG ACGGTATCAG GCGCACCAAC ACCATTCTGG CGTTTCGTCG GTATTCGGCG CAAGATCTGA AGGCGGCGTG GGATATTGGT GTGGCGTAG
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Protein sequence | MLTAFVLIQA EPAKIAQIAQ TVANLPNVAE VYSVTGDFDI IAVLRLAEYE QLAEVVPESL ARIDGIRRTN TILAFRRYSA QDLKAAWDIG VA
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