Gene Rcas_3945 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_3945 
Symbol 
ID5541451 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp5152230 
End bp5152508 
Gene Length279 bp 
Protein Length92 aa 
Translation table11 
GC content59% 
IMG OID640896053 
ProductAsnC family transcriptional regulator 
Protein accessionYP_001433996 
Protein GI156743867 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.292927 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCACCG CTTTCGTGCT CATTCAGGCT GAACCGGCAA AGATCGCGCA GATCGCGCAG 
ACAGTCGCCA ACCTGCCGAA TGTTGCGGAG GTCTACAGTG TCACCGGCGA CTTCGACATC
ATTGCGGTGC TTCGATTGGC GGAGTACGAG CAACTTGCCG AGGTTGTGCC GGAAAGCCTG
GCGCGGATCG ACGGTATCAG GCGCACCAAC ACCATTCTGG CGTTTCGTCG GTATTCGGCG
CAAGATCTGA AGGCGGCGTG GGATATTGGT GTGGCGTAG
 
Protein sequence
MLTAFVLIQA EPAKIAQIAQ TVANLPNVAE VYSVTGDFDI IAVLRLAEYE QLAEVVPESL 
ARIDGIRRTN TILAFRRYSA QDLKAAWDIG VA