| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3943 |
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| Symbol | |
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| ID | 5541449 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 5149413 |
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| End bp | 5151518 |
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| Gene Length | 2106 bp |
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| Protein Length | 701 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640896051 |
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| Product | hypothetical protein |
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| Protein accession | YP_001433994 |
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| Protein GI | 156743865 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.627238 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.614013 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCCTT TTGATAGTGC GCTGAAGAGC AATGTGCTCC GCTCCGGCGG GGCGACGACG
CGATACGCCG TCATTCCGGC GCTACTGGCG GTCGGGTGGC TGGCAGCGAT TGCCGTCTTT
GGTTCGTCCG ACGTTCTTGT CTGGGCGCTT TCGAGCGCCG GAAGGCTGGC ATTGCCGGCA
GGCGCAGCGC TGGCGCTCTG GATTGTTCCA GGGATGGCAT TGATCAGCCT GCTCTGGCGC
GACCATACCT TGAGCGTCAT CGAGCGCATT GGCGTGGCGT GGGGGATCGG AGCAGCGCTG
CCGCCGATCC TGTTGCTTCT GGCGGATCTT CTCGATCTGC CCTGGAATCG TCTCACGACG
ATCATGTATG TGGTTCTTGC CGTGAGTGTC TGGCTGTTTG CAGTGTGGCG CAACACAAAG
GCGTCAGAAC GCGCGCCACA GCGTGATCCG GCGAACGGAC GGATTGCTCA AGGCTATATC
GTCCCCCTGA TGATCGGTCT CGTGGCGCTG GCGCTGATTG CCCGTCTCTA TACCACGCGC
GAGATGCTGG TTGGCTCCAA TGTGGACAGC TATCATCACA CGCTGATTGT GCAACTGCTG
GTCGAGCGAC AGGGGTTGTT CCAGTCATGG GAGCCGTATG CGCCACTGGC AACCCTGACG
TATCACTACG GCTTCCATGC CAATGCGGCA TTCGTTTCGT GGCTCACCGG CATCCCGGCG
ACACGCGCTG TCGTTGAGGT CGGGCAAATA ATGAATGCAG CCACGCTTCT CACTGTCTTT
GCATTGACTG TCCGCTTGAC CGGCAGCGTG ATCGCTGGCG TATGGGCGGC GCTGATTGTC
GGGTTCTATA ATACGTTGCC GGCCTTTTTG ACGTTTTGGG GGCGCAATCC TTTCGTTACG
AGCCACGTTA TTCTCGGCGC TGTGCTGATC GTCTGGATAG CAGCCATCGA GTCGCCGCGC
CACAATTGGC GATTGCTGGC GTTGGCAGGG ATCGTGAGCG CCGGGCTGTC GTTGAGTCAT
TATCAGACAA CCATCCTGGC AGCGCCGATG ATCCTGGTCT CTCTGCTGAC GCTGCGTTTG
CACGCTTCAC CCGGCATGAT GCTGGCGACT CTGGGACACG CCGCGACGAT TGGCGCTGTC
GCGCTTCTGC TGACGCTGCC ATGGCTGCTG CACGTCTCGA GTGGCTATCT GGATCGAAAT
GTGGTGCATG CCATGCGCCC CGAAGCCGCA GCCGGGCAGA TTCTGGCGGC AGCGGTACCC
GCTCTTGCAC CGCTTTATCT CAAAGGTCCG GTCATTGCAG CCGCGCTGAT TGGTCTGGCG
CTGGCAGCGC GACGACGCTC CTGGCATGCG CTCCTGCCCG CCGGGTGGGT GCTGGCGGCT
CTGGCGACCG CGATGCCGCA TCTGCTCGGA TTGCCCGGCA TCGGAGTGGT TCAGGGAGAT
GTTGCCGCTA TGATTCTCTA CCTGATGGCA ACGCCGCTGG CAGGCGTCAC ACTGGCATCG
ATCGGCGAAG TGCTGGAACG GGTTGCACCA CGACTGGCGA TCATTCCCAT CGCAACCGCC
ATCATCCTCG TCAGCGCCTG GGGTGTTGGA TGGCAACGCG ATCTGGTTCC AGCGTATATG
CGAATGGTTA CGCCAGCGGA TATGCAGGCA ATGGAATGGG TGCGCGCGAA TACGCCGCCG
GCTGCGCGTT TCATTGTCAA CAGTCATCCG ATCTATGGCG GTGATATGAT CGTCGGAACG
GACGCCGGAT GGTGGTTGCC GTTCTTTGCC GGACGACAGA CGAATGTGCC GCCGATGACA
TATGGGAGCG AGTTGAGCGT CGATCCGCAG TATGCATTAG ACATCAACGC ACTGGCGCGC
GACCTGCGAC GCCGACCGTT GACCGATGGC CGTCCTGTGG TGATTGATCT GACACTTCCT
GAAACGATTG ATCGGTTACG TAGTGCTGGC TATACCTTCG TCTATAGCGG CGCGCAATCG
ATTGCCGGTC CCGGCGGCAT TCCGGCGCCA GACCGTATCG ATACCGCCAG ATTGCGTACA
AGTCCGCACT TCCGCCTGGT GTACGACCGG GACGGCGTTG AAATCTTCGA GTTGGTGACG
CAATGA
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| Protein sequence | MKPFDSALKS NVLRSGGATT RYAVIPALLA VGWLAAIAVF GSSDVLVWAL SSAGRLALPA
GAALALWIVP GMALISLLWR DHTLSVIERI GVAWGIGAAL PPILLLLADL LDLPWNRLTT
IMYVVLAVSV WLFAVWRNTK ASERAPQRDP ANGRIAQGYI VPLMIGLVAL ALIARLYTTR
EMLVGSNVDS YHHTLIVQLL VERQGLFQSW EPYAPLATLT YHYGFHANAA FVSWLTGIPA
TRAVVEVGQI MNAATLLTVF ALTVRLTGSV IAGVWAALIV GFYNTLPAFL TFWGRNPFVT
SHVILGAVLI VWIAAIESPR HNWRLLALAG IVSAGLSLSH YQTTILAAPM ILVSLLTLRL
HASPGMMLAT LGHAATIGAV ALLLTLPWLL HVSSGYLDRN VVHAMRPEAA AGQILAAAVP
ALAPLYLKGP VIAAALIGLA LAARRRSWHA LLPAGWVLAA LATAMPHLLG LPGIGVVQGD
VAAMILYLMA TPLAGVTLAS IGEVLERVAP RLAIIPIATA IILVSAWGVG WQRDLVPAYM
RMVTPADMQA MEWVRANTPP AARFIVNSHP IYGGDMIVGT DAGWWLPFFA GRQTNVPPMT
YGSELSVDPQ YALDINALAR DLRRRPLTDG RPVVIDLTLP ETIDRLRSAG YTFVYSGAQS
IAGPGGIPAP DRIDTARLRT SPHFRLVYDR DGVEIFELVT Q
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