Gene Rcas_3941 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_3941 
Symbol 
ID5541447 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp5147502 
End bp5148215 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content57% 
IMG OID640896049 
Productmethyltransferase type 11 
Protein accessionYP_001433992 
Protein GI156743863 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAATA CGATCTATCG CGGTCGACCG ATCCGCTATG GGTACACGGG TATCGAGAAG 
CGCCTTGCTG CACTGCGGAC GATGCGATCC TGGCATGGCG CGCGGGCGCT TGATGTGGGT
TGTGGTAACG GCGCCTATAC CCTGGCAATC GGGAGTGAAG CCGCGCTGGT CTGGGGTGTC
GATATCGATC AGCACTGGCT GAACGAATTT ATTCGCCATC CTCAGATCAA GCCAACAATT
GGCGTGGGGC AGGCTGATGG CGCATGGTTG CCATTTCAGA ACGCCGCCTT TGACGTTGTT
TTTTGTATTG AGACGATTGA ACACGTTACA GACGAGCGAG CCGTGTTGCG CGAAATCCGG
CGCGTCCTGC GCAAGGATGG AACACTGTTG CTGACGGCGC CAAACAAATG GTTTCCATTC
GAGACCCATG GATTGCGCGG CATCCCGCAT AGTTATTTTA TCGCGTTTGC TTCATGGCTG
CCCGATCCGC TTCATCATCG GTATGCCAAC GCCCGCATCT ACACGGCACG CAGCATCCGA
CAACTGCTCG AAGAGACGGG GTGGCGTGAT ATTCGCGTCG ATTGGATGTC GCCGCCATTC
GATATGCTGC GCCCACGTGA ACTGCAACCG CTGTTTCGCG CTGTCGCCAA CCTTCTTGAT
CGGACGCCCT GCCGCCGGTT TGGCGTCTCG CTGATTGTCG CCGCGACAAA ATAG
 
Protein sequence
MKNTIYRGRP IRYGYTGIEK RLAALRTMRS WHGARALDVG CGNGAYTLAI GSEAALVWGV 
DIDQHWLNEF IRHPQIKPTI GVGQADGAWL PFQNAAFDVV FCIETIEHVT DERAVLREIR
RVLRKDGTLL LTAPNKWFPF ETHGLRGIPH SYFIAFASWL PDPLHHRYAN ARIYTARSIR
QLLEETGWRD IRVDWMSPPF DMLRPRELQP LFRAVANLLD RTPCRRFGVS LIVAATK