Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_3941 |
Symbol | |
ID | 5541447 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 5147502 |
End bp | 5148215 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640896049 |
Product | methyltransferase type 11 |
Protein accession | YP_001433992 |
Protein GI | 156743863 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGAATA CGATCTATCG CGGTCGACCG ATCCGCTATG GGTACACGGG TATCGAGAAG CGCCTTGCTG CACTGCGGAC GATGCGATCC TGGCATGGCG CGCGGGCGCT TGATGTGGGT TGTGGTAACG GCGCCTATAC CCTGGCAATC GGGAGTGAAG CCGCGCTGGT CTGGGGTGTC GATATCGATC AGCACTGGCT GAACGAATTT ATTCGCCATC CTCAGATCAA GCCAACAATT GGCGTGGGGC AGGCTGATGG CGCATGGTTG CCATTTCAGA ACGCCGCCTT TGACGTTGTT TTTTGTATTG AGACGATTGA ACACGTTACA GACGAGCGAG CCGTGTTGCG CGAAATCCGG CGCGTCCTGC GCAAGGATGG AACACTGTTG CTGACGGCGC CAAACAAATG GTTTCCATTC GAGACCCATG GATTGCGCGG CATCCCGCAT AGTTATTTTA TCGCGTTTGC TTCATGGCTG CCCGATCCGC TTCATCATCG GTATGCCAAC GCCCGCATCT ACACGGCACG CAGCATCCGA CAACTGCTCG AAGAGACGGG GTGGCGTGAT ATTCGCGTCG ATTGGATGTC GCCGCCATTC GATATGCTGC GCCCACGTGA ACTGCAACCG CTGTTTCGCG CTGTCGCCAA CCTTCTTGAT CGGACGCCCT GCCGCCGGTT TGGCGTCTCG CTGATTGTCG CCGCGACAAA ATAG
|
Protein sequence | MKNTIYRGRP IRYGYTGIEK RLAALRTMRS WHGARALDVG CGNGAYTLAI GSEAALVWGV DIDQHWLNEF IRHPQIKPTI GVGQADGAWL PFQNAAFDVV FCIETIEHVT DERAVLREIR RVLRKDGTLL LTAPNKWFPF ETHGLRGIPH SYFIAFASWL PDPLHHRYAN ARIYTARSIR QLLEETGWRD IRVDWMSPPF DMLRPRELQP LFRAVANLLD RTPCRRFGVS LIVAATK
|
| |