| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3937 |
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| Symbol | |
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| ID | 5541443 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 5137386 |
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| End bp | 5138171 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640896045 |
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| Product | ribonuclease PH |
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| Protein accession | YP_001433988 |
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| Protein GI | 156743859 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0689] RNase PH |
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| TIGRFAM ID | [TIGR01966] ribonuclease PH |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.510656 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.641897 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCGAA ATGATGGACG AGCGCCCTCT GATCTGCGTC CGGTGCGGAT CAGCATCGAC
ACCTACGGCT ACGCCGAAGG TTCGGCGCTG ATCGAAATGG GAAATACTCG GGTGCTCTGC
ACTGCCAGCG TCGAAGAGGG GGTTCCGCAA TGGCTGCGCG GTCAACAGCG CGGCTGGGTC
ACTGCCGAAT ATGCGCTCCT GCCGCGCTCG ACGGCACAGC GCACCCGCCG TGAACGCAAC
GGTCTCTCCG GGCGCACTCA GGAGATCCAG CGCCTGATCG GGCGGGCGCT GCGCGCTGCG
GTGGCCCTTG AAGCGCTCGA TGGCTTCACG GTCACGATTG ACTGCGATGT GCTCCAGGCG
GATGGCGGTA CACGCACGGC ATCGATCACC GGCGGATATG TGGCGTTGGC GCTGGCGCTG
CATCGCCTGA CTGCCGCCGG ACGCCTTGCC GCCAACCCGA TCCGGCGCGC GGTGGCCGCC
GTCAGCGCCG GGTACGTCGG TGGAAACGCA CTGCTCGATC TCGACTATAG CGAAGATAGT
GTCGCCGATA TGGATTGCAA CCTGGTGTTG ACCGACGATG GCGCGATTGT CGAGGTTCAG
TCCACCGCTG AGGCGCGTGC GGTCAGTCGC GCGGAGTTCG ACGTCCTGAT CGACCTGGCA
AGTGATGGCA TCCATCGCCT GCTGGCGCTC CAGCGCGAGG CGCTGGCGCC GGTTGTGGAA
AGGTTGGGGG TGGCAAGTGC GGAGTTGCAA TCGGAAGATC GGAGCGTGGC AGATGGTGGC
GCGTAG
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| Protein sequence | MIRNDGRAPS DLRPVRISID TYGYAEGSAL IEMGNTRVLC TASVEEGVPQ WLRGQQRGWV
TAEYALLPRS TAQRTRRERN GLSGRTQEIQ RLIGRALRAA VALEALDGFT VTIDCDVLQA
DGGTRTASIT GGYVALALAL HRLTAAGRLA ANPIRRAVAA VSAGYVGGNA LLDLDYSEDS
VADMDCNLVL TDDGAIVEVQ STAEARAVSR AEFDVLIDLA SDGIHRLLAL QREALAPVVE
RLGVASAELQ SEDRSVADGG A
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