| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3934 |
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| Symbol | |
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| ID | 5541440 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 5132793 |
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| End bp | 5134712 |
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| Gene Length | 1920 bp |
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| Protein Length | 639 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640896042 |
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| Product | acetate--CoA ligase |
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| Protein accession | YP_001433985 |
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| Protein GI | 156743856 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
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| TIGRFAM ID | [TIGR02188] acetate--CoA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.118564 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACTCA CCTACGCGAT TGGTTCGACC AACAACGTCG AAGCCACCGA CGTTGTTGTG
GGTCCACTGG AGGATGCTGC GCGCAATGCG AACCTGACCG ATTACGAGTC GGTCTATCGT
CGGTCGATTG AGGATCCGCA GGGGTTTTGG GCAGAGGCGG CACAGGCGCT GCACTGGTTC
GAGCCGTTCC ACACCGTGCT CGATGAAAGC AATGCGCCCT TCTACAAATG GTTCGTCGGC
GGCAAGACGA ATATGGCGTA CAACGCTCTT GATCGCCACG TGCAGACCTG GCGCAAAAAC
AAGGTGGCGC TGATCTGGGA GAGTGAAGAC GGCATTGTTC GCACCTACAC CTACTGGCAA
TTGTACCGCG ACGTCAATAA GTTTGCCAAT GTGCTCAAAT CGCTTGGCGT GCGCAAAGGC
GACCGGGTGG CGATCTACAC GGGACGCTGT CCGGAGCAGG CAATTGCAAT GCTGGCATGC
GCCCGCATTG GCGCCGTGCA TACGGTCGTC TACGGCGGTC TTTCGACCGA GGCGCTGCGC
AGTCGCATCG AAGATGCGCA TGCCAAAGTG CTGGTGGTGG CGGATGGCAG TCTGCTGAAC
GGCAAGATCG TCAAACTGAA GGAAATCGCG GATCAGGCGG TCGATCATGC GCCGTCGATT
GAAACGTGTG TGGTCATCAA ACGCACCGGG CACGACGTTG ATATTCGGAA TGGGCGCGAC
TACTGGTGGC ACGAGTTGAT GAGCCTGCCT ATCGCCTCGG CGCGTTGCGA GAGTGAGCCG
CTCGACGCAG AAGACCCCTT CTTCATCATC TATACGTCAG GCTCCACCGG CAAACCCAAG
GGTGTGGTGC ATACGCTCGG CGGGTATATG GTGGATGTGT ATACAACGCT GAAGTACGTG
CTCGATTTCA AGGAAGAAGA TACGCTCTTC TGCACCTCCG ACGCAGGATG GATCGTCGGG
CACTCGATTG TGCTGTATGG TCCGTTGATG CACGGCATTA CCACGCTGAT GTACGAAGGC
GCGCCCGCCT ACCCCTACCC GGATCGCTGG TGGCACCTGA TCGAGCGGCA TGGCGTGACG
CTGATGTTCA CGGCGCCAAC CGGTGTGCGT GGGTTGATGC GGTATGGCGA CGCCTGGCCC
AAACGACGCG ATCTGAGCAC CCTGCGTCTG CTGGCGTGCG CGGGTGAGCC GCTGAACCCT
GAAGCCTGGC GCTGGTTCTA CGAGGTGATC GGGCAGCGCC GCTGTCCGGT GATCGATAAC
TGGTGGCAGA CCGAAACCTC GCGCCCGATG ATTTCGAACT TTGCTTCGCT GCCGATGAAA
CCCGGTTCCT GCGCATTCCC GGTTCCGGGA GTCGCACTCG ACATTGTTGA TGAGCAGGGG
CAGAGCGTGC CGCCCGGCGT CGAAGGCGCA CTGGTCATCA CTCGCCCATG GCCCTCGATG
TTGCGCACCA TCTATGGCGA CGATCAGCGC TACATCGATC AGTACTGGAG CCGCTATCCG
GGGAAGTACC TCACCGGCGA CGCCGCCAAG CGCGATGCTG ATGGGTATAT GTGGATCATT
GGTCGCACCG ACGATGTCAT CAAAGTCTCC GGCTATCGCC TGGGCACTGC GGAGGTCGAA
AGCGCCCTCG TGTCGCATCC GGCAGTGGCG GAAGCCGCAG TCATCGGTTT GCCGCATCCG
GTGCGCGGGA ATGCGATTCA TGCCTTCGTT CTGCTCCGCG CCGGATATTC GCCCTCGGAA
GAACTGGCGA ATGAATTGAA AGCGCACGTC GGCAAGGTGA TGGGACCTAT CGCCAAGCCG
GAGACGATTT CGTTCCCGCC GACTCTACCG AAGACCCGTT CGGGCAAGAT TATGCGCCGT
GTGCTGCGCG CTCAGGCGCT CGGCGAGCCG CTCGGCGACC TCAGTACGAT GGAGGGGTGA
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| Protein sequence | MTLTYAIGST NNVEATDVVV GPLEDAARNA NLTDYESVYR RSIEDPQGFW AEAAQALHWF
EPFHTVLDES NAPFYKWFVG GKTNMAYNAL DRHVQTWRKN KVALIWESED GIVRTYTYWQ
LYRDVNKFAN VLKSLGVRKG DRVAIYTGRC PEQAIAMLAC ARIGAVHTVV YGGLSTEALR
SRIEDAHAKV LVVADGSLLN GKIVKLKEIA DQAVDHAPSI ETCVVIKRTG HDVDIRNGRD
YWWHELMSLP IASARCESEP LDAEDPFFII YTSGSTGKPK GVVHTLGGYM VDVYTTLKYV
LDFKEEDTLF CTSDAGWIVG HSIVLYGPLM HGITTLMYEG APAYPYPDRW WHLIERHGVT
LMFTAPTGVR GLMRYGDAWP KRRDLSTLRL LACAGEPLNP EAWRWFYEVI GQRRCPVIDN
WWQTETSRPM ISNFASLPMK PGSCAFPVPG VALDIVDEQG QSVPPGVEGA LVITRPWPSM
LRTIYGDDQR YIDQYWSRYP GKYLTGDAAK RDADGYMWII GRTDDVIKVS GYRLGTAEVE
SALVSHPAVA EAAVIGLPHP VRGNAIHAFV LLRAGYSPSE ELANELKAHV GKVMGPIAKP
ETISFPPTLP KTRSGKIMRR VLRAQALGEP LGDLSTMEG
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