| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3933 |
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| Symbol | |
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| ID | 5541439 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 5131878 |
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| End bp | 5132576 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640896041 |
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| Product | DNA polymerase III, epsilon subunit |
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| Protein accession | YP_001433984 |
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| Protein GI | 156743855 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
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| TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.165609 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0812308 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTTTGT TTCGCCGCCG ACCGGCTCAT CTCCCTGAGT CGGTCGTTGC CTATCTCGAG
GCGCAGCGTC CCGATCCGGC GCTGCCCTGG CGCGCTGCGC CCTACAGCGT CATGGATGTC
GAGACCACCG GACTGAACCC GCGCCGCGAT GCGCTGCTGG CAATCGGGTT GGTGGAGATT
GACGAAGGGC GCATTCGTAT GGATCGGCGC TGGTACACCC TCGTTCATCC GCCGGATGAT
GCTCCGATCA ACCCGGAATC TATTCGTATC CATGGTCTGC TGCCGCAGGA CGTGGAGCAT
GCGCCGCCGC TCGATGCGGT CGTCCCCGAC GTGTTACGGC GATTGACCGG ACGGGTGCTG
GTGGTGCATG TGGCCGATGT GGACATCGGC TTTCTGCGTC AGGCAATGCG GCGGTTGTAC
GGCGTTGATC CGCGCGGTCC TGCCATCGAT ACGGCGCGCC TGGCGTGGCA TTTTCAGCGC
CATCAGCGCC TGATCGAAGG ATTGGGATCA GAGCAGGAAC CGGCATTGCA ACTGCGCGCA
CTGGCGGAAA GTCTCGGATT GCCCGTTTAC CCCGAACACA ACGCCTTCAA CGATGCTCTG
ACGACGGCGC AACTCTTCCT GGCTCAGGTG AGCATGTTCG AGGCGCAGAG CACGCCGCGT
CTGCGCGATC TCCTGCGTGC CGGCGGATGT TTGCGGTGA
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| Protein sequence | MFLFRRRPAH LPESVVAYLE AQRPDPALPW RAAPYSVMDV ETTGLNPRRD ALLAIGLVEI
DEGRIRMDRR WYTLVHPPDD APINPESIRI HGLLPQDVEH APPLDAVVPD VLRRLTGRVL
VVHVADVDIG FLRQAMRRLY GVDPRGPAID TARLAWHFQR HQRLIEGLGS EQEPALQLRA
LAESLGLPVY PEHNAFNDAL TTAQLFLAQV SMFEAQSTPR LRDLLRAGGC LR
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