Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_3926 |
Symbol | |
ID | 5541432 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 5124401 |
End bp | 5124931 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640896034 |
Product | translation elongation factor Ts |
Protein accession | YP_001433977 |
Protein GI | 156743848 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0264] Translation elongation factor Ts |
TIGRFAM ID | [TIGR00116] translation elongation factor Ts |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0719169 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCTGAAA TTACTGCTCA AATGGTGAAG GAACTGCGCG AACGCACCGG TGCAGGCGTC AAGGAGTGCA AAGATATTCT CGAGCAAACC AACGGCGACT TCGAGAAGGC CATCGAGGAG TTGCGCAAAC GTGGTTTGCG TGTGAGTGAC AAGGTTGCCG GGCGTGAGGC GAAGGAAGGG CGCATCGAGG TTTATATCCA CCACGGTGCG CGGGTTGCTG CAATGGTCGA GCTGAACTGC GAAACCGATT TCGTGGCGCG CACCGATGAT TTCATTCAAC TGGCGCGCGA TATTGCGATG CAGGTTGCCG CCATGAACCC GCGCTACGTC CGCGTCGAAG ACGTGCCGGA GAGCGAGATC GTCGCCAGCG GGATGTCGCC AGAACAGTTC TACCGTGAGC ACGTGCTGCT GAAACAGGTG TTCATCAAGG ACTCGTCGCA GACGATTGAG GAAAAGGTTC AGGCTGCGAT TGCAAAGATC CGCGAGAACA TCGTTGTGCG ACGCTTCGTT CGCTACGAAA TTGGCGGCTA G
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Protein sequence | MAEITAQMVK ELRERTGAGV KECKDILEQT NGDFEKAIEE LRKRGLRVSD KVAGREAKEG RIEVYIHHGA RVAAMVELNC ETDFVARTDD FIQLARDIAM QVAAMNPRYV RVEDVPESEI VASGMSPEQF YREHVLLKQV FIKDSSQTIE EKVQAAIAKI RENIVVRRFV RYEIGG
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