| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3922 |
|---|
| Symbol | |
|---|
| ID | 5541428 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | - |
|---|
| Start bp | 5121260 |
|---|
| End bp | 5121613 |
|---|
| Gene Length | 354 bp |
|---|
| Protein Length | 117 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 640896031 |
|---|
| Product | DNA polymerase beta subunit |
|---|
| Protein accession | YP_001433974 |
|---|
| Protein GI | 156743845 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.0657046 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACAA CTGCTGTTAC CCCGTCGCTC GACCGTCGCG CCCTGCTGGA AGCGGAACTG
GCGCGATTCG TGCAGATTCT GCGCGAACAG TATCAGCCTG AGCGGATTAT TCTGTTTGGC
TCGCTGGCGG AGGGCGAAAC GCACGAGTGG TCGGATATTG ATCTTGTGAT CATCAAACAG
ACAGATAAAC GATACCTGGA CCGTATCCGT GAGGTGCTTT TGTTATTACA ACCCAGAGTC
GGGATTGATG TCATCGTGTA TACACCCGAC GAGTTTGCGA CGCTGAGACA AACAAACATG
ATGGTTCGTG AAGAAATTGC CTCCAAAGGG AGAGTGATCT ATGAGCGATC CTGA
|
|---|
| Protein sequence | MSTTAVTPSL DRRALLEAEL ARFVQILREQ YQPERIILFG SLAEGETHEW SDIDLVIIKQ
TDKRYLDRIR EVLLLLQPRV GIDVIVYTPD EFATLRQTNM MVREEIASKG RVIYERS
|
|---|
| |