Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_3909 |
Symbol | |
ID | 5541415 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 5110820 |
End bp | 5111800 |
Gene Length | 981 bp |
Protein Length | 326 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640896019 |
Product | ornithine cyclodeaminase |
Protein accession | YP_001433962 |
Protein GI | 156743833 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2423] Predicted ornithine cyclodeaminase, mu-crystallin homolog |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.263994 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.077542 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGAATCC TGAGCGCTGA CGATGTGCGA CGCGCTGTGA CGATGCCCGC CGCAATTGAG GCGGTCGCCT CTGCATTCGT GCAACTTTCG AGCGGGCGTG CCGTTGTGCC GCTACGCGCC CATCTTCAGC AACGCGCCCA TGAGTCGCAC ACATTCGTGA TGCCAGCGTT GCTGGAGGAA AGCGGCGGCC TGGGTTTGAA GGTGGTGTCG GTCTTTCCGC ACAATGCTGC ACGTTACGCT CTGCCGCGCA TTCACGCCCT CGTGACGATT CTCGATGCTG CGACTGGACG ACCGGCCGCT GTGCTTGAAG GTTCGTATCT GACGGCGCTT CGCACCGGCG CTGCGTCGGG CGCGGCGACT CGCGCGCTTG CCCGGCAGGA AGCGCGTGTG CTGGTGATCA TCGGCGCTGG TGTGCAGGCG TATCATCAGG TTGAAGCTGT GTGCGCCGTG CGCCCAATCG AGCGGGTAAT CATCGTCAAT CGCAATCGTG AACGCGCCGA ACGTCTGGCA GCGGCGCTGC GCGAACGCGC CATTGTCGCC AATGTTGAGA TGGTCGCGTC TGCTGCGGCT GCTGTTCCAC AGGCGGATGT TATCTGCTGT GCGACCTCCT CGCCGACGCC GGTGTTCGAC GATGTCGATC TGCGCCCTGG GACCCATATC AACGGCATTG GCTCCTTCAC GCCGCGTATG GTCGAAGTGC CGCCGGAAAC CGTCGGTCGG GCATATGTGG TGGTGGATCA ACAAACGGCG GCATGGGCTG AAGCGGGCGA TCTCCAGCAT GCCCGCAATC TGGGGTTGCT CGATGAGTCA CAAACCGTCG AGTTAGGTGC AGTGCTCAAT GGTCGCTCGC CGGCACGCAC GAGTGATGAG CAGATTACGT TTTTCAAATC AGTCGGCAAT GCTGTGCAGG ACATTGCCGT TGCGCAGTTG GCGCTGCGTG AAGCGGAACG ACTGGGCCTG GGGATCGAGG CGCGCTTGTG A
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Protein sequence | MRILSADDVR RAVTMPAAIE AVASAFVQLS SGRAVVPLRA HLQQRAHESH TFVMPALLEE SGGLGLKVVS VFPHNAARYA LPRIHALVTI LDAATGRPAA VLEGSYLTAL RTGAASGAAT RALARQEARV LVIIGAGVQA YHQVEAVCAV RPIERVIIVN RNRERAERLA AALRERAIVA NVEMVASAAA AVPQADVICC ATSSPTPVFD DVDLRPGTHI NGIGSFTPRM VEVPPETVGR AYVVVDQQTA AWAEAGDLQH ARNLGLLDES QTVELGAVLN GRSPARTSDE QITFFKSVGN AVQDIAVAQL ALREAERLGL GIEARL
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