| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3900 |
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| Symbol | |
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| ID | 5541406 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 5105465 |
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| End bp | 5106034 |
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| Gene Length | 570 bp |
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| Protein Length | 189 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640896011 |
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| Product | cold-shock DNA-binding domain-containing protein |
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| Protein accession | YP_001433954 |
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| Protein GI | 156743825 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000124121 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.525075 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTTCA AGGACAGGCA CATTCCGTGC AAGGATTGCG GCGGCGAGTT CGTATTCACG
GCAGGCGAGC AGGAGTTCTA TGCCCAGAAG GGATTTACCA ATGATCCCAC CCGTTGCCCG
GCAGGGCGTC GAGCACGCAA GGAAGGGCGC AGTCTGATCG ATGTGGCGGG TGGTCGCGCA
TGCCCGCACG ATGTGTCGGG GCAGGGGCGT ATCACCGACG AGGCTGCCGA AGTCAGCAGC
AGCGCGCGTC CCCGGCGCTC GGACGATTGG GCGCGCTCAT ATGACCGACC GCGCAGCGAG
TCGCGTGGCT GGTCGAGCGA CCGATCGCGG CGTGAGCGTG AACCGTACAC CGGTCCGCTG
CCGTCGGGTC CGGTCAGCGC AACGGTTGTT CGCATTGATC CTGCCGGGCG CTTTCTCTTT
GCCCGTGTCG ATAACCCACA GTTTGATGTG TATGTCCATG GATCACTGTT CAGTCAGGTG
CGCCGATCAA TTCAGGAAGG CGATCAGATT TCGGTGACAG TCGAAGCAAG CGATCGTGGA
CCTCGCGCGC GAACGTTTGA TCTGGTGTAG
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| Protein sequence | MSFKDRHIPC KDCGGEFVFT AGEQEFYAQK GFTNDPTRCP AGRRARKEGR SLIDVAGGRA
CPHDVSGQGR ITDEAAEVSS SARPRRSDDW ARSYDRPRSE SRGWSSDRSR REREPYTGPL
PSGPVSATVV RIDPAGRFLF ARVDNPQFDV YVHGSLFSQV RRSIQEGDQI SVTVEASDRG
PRARTFDLV
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