| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3898 |
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| Symbol | |
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| ID | 5541404 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 5101620 |
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| End bp | 5103023 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640896009 |
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| Product | hypothetical protein |
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| Protein accession | YP_001433952 |
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| Protein GI | 156743823 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000694886 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATCCGG TCTGGGAAGG TTTCTTCATC CACTCGGCAA TGTTCGTTGC CATCGTGTCC
GCTTTCCACG TGCTCGCTTC GCACCTGACG GTCGCAGCCG CGTGGTTCAA CCTGTACCTG
GAGCGGCGCG CAGTATACGA GAATCGCCCG GAACTATACG TCTATCTCAA GCGAAGCGCC
CTGGGATTGC TGGTGTTCGC GTATGTCTTC GGAGCGATGG CCGGAGTGGG CATCTGGCAA
ACAACCACCG CCGCTAACCC GCGCGGCATT TCTACCCTCA TCCACAACTT CGTGCTCTAC
TGGGGATCAG AGTGGTACAT GTTCCTGATC GACGTGGTAG GAATCATTGC GTATTACTAC
ACGTTCGAGC GCGTCAGCCC GAAGACGCAC CTGCGTCTGG CATGGATCCT GGCATTGGGA
GGCACCGGTA CACTGACAAT CATCGTTGGC ATTCTGTCGT TCAAATTGAC GCCGGGCCTC
TGGTTCGAAA CGGGGGCGAG TCTGAACGGA TTCTTCAATC CCACGTTCTG GCCCCAACTC
TTCATGCGAT TTGCCCTGAT GTTTACCATC ACGGCAGCCT GGGCGCTTTT GATTGTCACC
GGACTGCCGA ACGGGTACTT TGCGCGTGAG CGCATTATTC GCATTGCGGC AGTCATGGGA
CTGGGCGGGT TGATCGTTGC GCTGGGCATC TGGTTCTTCT GGTACGACCC CACTCTGCCG
GCTCACGCGA AGACCATTCT GCGCTCGCCT GCCATTCCAC CGATCACCTT CACGGTCATC
ATCGGCGGTC TGATTGCGAC ATTCCTGGGG CTTCTGTTTG CGCTGGTCAT GCCGCGCCGT
CAGCATCAGA TTATCGCCCT GGGCGCAATG CTGGTGTTGT TTGCAGCCAT CTTCGGCGCC
GAACGCACTC GTGAGGTCAT TCGCAAGCCC GACATTATTG CCGGCTATAT GTCGTCGAAT
CAACTGGTAT TCAACGATCT TCCCGCTCGC GGCATTCAGC GCGAAGAGCA ACCGTTGAAC
GAAACCGGCA TGCTCGGCGC ACTGCCGTTT CTGCCGCGCC CGGATCAGAT TTCAGTCGCA
GCAACGGGCG CTTCCAGCCA TCAGGTTGCT ATGGGACGGG TGCTGGTCAT TCAACAGTGC
GCGGCTTGCC ACAATGTCAG CAACCAGACG GCGATCACCG TCTTCGATCA GCGGCTGGCG
TTGCGTTCGC TGGCGCAGTT GCTCGAACGA CGCAAAATGA CGACCGCGCC AAAAATTGAG
ACCTACCTGA ACGGCATTGG GGCGTTCCCA TATATGCATC CCGTCGTCGG CACGCCCGAA
GAGCGGGCGG CGATGGCACT ATACCTGGAG TATTTCTTGC AACAACAGCA CGCACCACAG
TCACAGGCGC AAGCCAGGAG GTGA
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| Protein sequence | MYPVWEGFFI HSAMFVAIVS AFHVLASHLT VAAAWFNLYL ERRAVYENRP ELYVYLKRSA
LGLLVFAYVF GAMAGVGIWQ TTTAANPRGI STLIHNFVLY WGSEWYMFLI DVVGIIAYYY
TFERVSPKTH LRLAWILALG GTGTLTIIVG ILSFKLTPGL WFETGASLNG FFNPTFWPQL
FMRFALMFTI TAAWALLIVT GLPNGYFARE RIIRIAAVMG LGGLIVALGI WFFWYDPTLP
AHAKTILRSP AIPPITFTVI IGGLIATFLG LLFALVMPRR QHQIIALGAM LVLFAAIFGA
ERTREVIRKP DIIAGYMSSN QLVFNDLPAR GIQREEQPLN ETGMLGALPF LPRPDQISVA
ATGASSHQVA MGRVLVIQQC AACHNVSNQT AITVFDQRLA LRSLAQLLER RKMTTAPKIE
TYLNGIGAFP YMHPVVGTPE ERAAMALYLE YFLQQQHAPQ SQAQARR
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