Gene Rcas_3896 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_3896 
Symbol 
ID5541402 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp5099931 
End bp5100350 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content57% 
IMG OID640896007 
Producthypothetical protein 
Protein accessionYP_001433950 
Protein GI156743821 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.831394 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGGTGG ATCGGCTGAC TGCATCAGAT ATGCTCCCTT CGTTGCGCGA TATGCGTCGC 
GTTGCCTTCC GCGCTGCTAT CCTGTTCCTC ATCTGGTGCA CGGCAATTCA TGCCGCCGCC
GCCTGCATCG TGCATTGTCA GATTGCACCG TGGATACAGC AATACATTGT GCAGCCGCTT
CCACTCCTTG TGTGCGACCT GAGCGAACGC GCATCGAATG CTGCCCAGCA AACCGTGTCG
GAGGACATCT TGCCGGAAGT TATTCAACCG GTGGCGCCGG CGGCAATGCT GATGATCGTA
TTTGTGCTGC GGATGGCCGG TATCATTGTG ACTGTTCAGA TAAATCCCCG GCATCAGGTT
CAACCGCCGC TCACTCCCCC GCCGCGCGGT ATGGCGTCTT CTTCACTCCA ATCCTGCTGA
 
Protein sequence
MLVDRLTASD MLPSLRDMRR VAFRAAILFL IWCTAIHAAA ACIVHCQIAP WIQQYIVQPL 
PLLVCDLSER ASNAAQQTVS EDILPEVIQP VAPAAMLMIV FVLRMAGIIV TVQINPRHQV
QPPLTPPPRG MASSSLQSC