Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_3896 |
Symbol | |
ID | 5541402 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 5099931 |
End bp | 5100350 |
Gene Length | 420 bp |
Protein Length | 139 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640896007 |
Product | hypothetical protein |
Protein accession | YP_001433950 |
Protein GI | 156743821 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.831394 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGGTGG ATCGGCTGAC TGCATCAGAT ATGCTCCCTT CGTTGCGCGA TATGCGTCGC GTTGCCTTCC GCGCTGCTAT CCTGTTCCTC ATCTGGTGCA CGGCAATTCA TGCCGCCGCC GCCTGCATCG TGCATTGTCA GATTGCACCG TGGATACAGC AATACATTGT GCAGCCGCTT CCACTCCTTG TGTGCGACCT GAGCGAACGC GCATCGAATG CTGCCCAGCA AACCGTGTCG GAGGACATCT TGCCGGAAGT TATTCAACCG GTGGCGCCGG CGGCAATGCT GATGATCGTA TTTGTGCTGC GGATGGCCGG TATCATTGTG ACTGTTCAGA TAAATCCCCG GCATCAGGTT CAACCGCCGC TCACTCCCCC GCCGCGCGGT ATGGCGTCTT CTTCACTCCA ATCCTGCTGA
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Protein sequence | MLVDRLTASD MLPSLRDMRR VAFRAAILFL IWCTAIHAAA ACIVHCQIAP WIQQYIVQPL PLLVCDLSER ASNAAQQTVS EDILPEVIQP VAPAAMLMIV FVLRMAGIIV TVQINPRHQV QPPLTPPPRG MASSSLQSC
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