| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3894 |
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| Symbol | |
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| ID | 5541400 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 5098013 |
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| End bp | 5099143 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640896005 |
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| Product | permease |
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| Protein accession | YP_001433948 |
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| Protein GI | 156743819 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0701] Predicted permeases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.932895 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTAGCC GCACCGTTCC GCCTATGTCA CGCGCCTCGT TTGAGCGCAT TGTGCCGGTT
GTCTCGCTGG TTGTGCTTGC CTTGATCATC GGTCAGTCGG TGGTGCAAAG CGTCAGCGCC
TGGCTTTCCG GCGCAGAAGC GAAGCATATC GTCCCGGTCT TCGAGGCGCC AATCGCCAGT
GCAGGCAAAG CATTGGGCGC CGCTCTCACC TCCTGGATGC CCGCCTGGAG CATTCCCACA
CCGTTTGGTC CACTCGATGT CAAGCATACG GCGTCGTACA CGATCTATGA ATGGTTCAAA
CTGCCAATCA TTCTCTTTCT GACGACCTAC GGCATGACAC TGTTGCGCCT GAGCATCAGC
ACCCGATGGA TTGAACGCTC CATCGGGCGG AATGATCTGC TGGGGGCTTC GGGTGGTGCG
CTGCTGGGCA TATTCACACC GGTCTGCTCC TGCACCGTCA CCAACATCTA CGCCGGCATC
GTTGCCGGCG GCGCAAGCCA GCGCGCCTCG TCGGCGTTTC TGTTTGCCAG CCCGGCGTTG
AATGAGTTCG CCATTCTTTT TATGTTTGTG ATCGTCGGAC CGTTCGGCGG GCTGGTCTAT
GTGCTGGCAG GTTTTGCCGC CGCGCTGGCG ACCGCGTATC TTGCGCCGGT TCTGGGGCTG
GATCCGGCGC GTTTTGTGCA GCAGGTCGTT TCACCGCACT TATGCGGTAC GATTGCCCGG
GAGAGCATTC TGGTTCGTGC GCACCGCGAG GCGTGGGCAT TGTTTAAGCG ATTGTTTGGC
GTTGTCCTGT TCAGTGGGTT GCTGGCAGGC ATTCTGGTCA ATTTTAACCT GACGCTGGTA
GAGAGTCTGA AACAGGCGGG CGCTGCGTGG TGGGGACCGC TCATCGCCAC CGTGCTCGGT
CTGCCGCTCG ACATTAATGC CGCTTCAACG GCGCCGATTC TGGTGGCATT GCACCAGATT
GTGCCGATTG GAACACTGGT GGCGGCAATG ATGGCAACGA CCGTCTCCTC AATCCCGGAG
TGGGCGATGC TCAATCGTCT GATTGGAAAG GCGGGAGCGA TCAAAGTCGT GCTCTGGTAT
GCAACCTATG TGGCGCTCCT GGGGTTGCTG CTCAACTGGT TGTTTGCCTG A
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| Protein sequence | MFSRTVPPMS RASFERIVPV VSLVVLALII GQSVVQSVSA WLSGAEAKHI VPVFEAPIAS
AGKALGAALT SWMPAWSIPT PFGPLDVKHT ASYTIYEWFK LPIILFLTTY GMTLLRLSIS
TRWIERSIGR NDLLGASGGA LLGIFTPVCS CTVTNIYAGI VAGGASQRAS SAFLFASPAL
NEFAILFMFV IVGPFGGLVY VLAGFAAALA TAYLAPVLGL DPARFVQQVV SPHLCGTIAR
ESILVRAHRE AWALFKRLFG VVLFSGLLAG ILVNFNLTLV ESLKQAGAAW WGPLIATVLG
LPLDINAAST APILVALHQI VPIGTLVAAM MATTVSSIPE WAMLNRLIGK AGAIKVVLWY
ATYVALLGLL LNWLFA
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