Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_3874 |
Symbol | |
ID | 5541379 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 5066293 |
End bp | 5067045 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640895984 |
Product | DtxR family iron dependent repressor |
Protein accession | YP_001433928 |
Protein GI | 156743799 |
COG category | [K] Transcription |
COG ID | [COG1321] Mn-dependent transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000018192 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.124247 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGTGAAA GCGTCGAAAT GTACCTGGTG ATGACCGCGC TCCTGCGCAG TGCGCCAGAT CAACCGGTTC CGCTGTCGTT GCTGGCGAGC AAACTCGGCG TATCACAGGT TTCCGCCAAC GAAATGTGCC ATCGTTTGGA GGAGCGCGGA TTGCTCTCGT ACCAACCGTA CAAGGGCGTT ACCCTCACGC CGGACGGCGA GGAGTGGGCA CAGCGCATTC TCTCGCGCCG TCGTCTCTGG GTCATCTTCC TTGTCGAAAA TCTGGGCATC GATCCAGAGG AAGCCGATAC ACTGGCGTGC CAGCTCGAAC ACATCACCTC GGAGCGACTG GTTGCGGCGC TCAAAGCCTT CCTGGAACGC GATCCTGAAG CACGTTCATC CATCAACCGC ACCCCTCAAC CACTCACCGC CTGCACCGCC GGAATGCGCG GCGTGGTGGC CACCATCGAC GTTGAGCCGG CAGCGGCAGC GTTTCTGGCG CAGCAGGGAG TTGTGCCCGG CGCCGACGTC GGAGTGCTGG CGGTCGGCAT CGATGGCGCT GTGCTGCTTC AGGTGGACGA CTACCAGGTG GCGCTGGCGT CTGCGCTTGC CGGTCGCATC ACGCTCGCTG CTGGATCGGC GGCGCACACG GCACGGCAGG CTGCATGGCG GCGGTGCAGC GCTTTCTGGT CGTGTGTGCG TGGTGAAGCG CCTCCGTGCC CAATCGAGAG CGTCGCCGAT GAGTCGGAAG TTGCAGCCCT TGCCAGGAGA TAA
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Protein sequence | MSESVEMYLV MTALLRSAPD QPVPLSLLAS KLGVSQVSAN EMCHRLEERG LLSYQPYKGV TLTPDGEEWA QRILSRRRLW VIFLVENLGI DPEEADTLAC QLEHITSERL VAALKAFLER DPEARSSINR TPQPLTACTA GMRGVVATID VEPAAAAFLA QQGVVPGADV GVLAVGIDGA VLLQVDDYQV ALASALAGRI TLAAGSAAHT ARQAAWRRCS AFWSCVRGEA PPCPIESVAD ESEVAALARR
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