| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3869 |
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| Symbol | |
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| ID | 5541373 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 5058344 |
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| End bp | 5059072 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640895978 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001433923 |
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| Protein GI | 156743794 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.605305 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.31919 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCTTC ACGGCAAGGC GGCGCTGGTC ACCGGCGGGG CGCGGCGATT GGGACGGGCG
ATCGCATTGG CGCTCGGTCG CGCTGGCATG CGCGTCGCTA TTCACTACCA TGCGTCAGCA
TCGGCGGCTG AGGAGGTCCT GGCGGAATTG CGCGCAACCG GCGCCTCCTG CATCGCCATC
CCTGGCGATC TGAGCCGTAC TGCCGATTGC GAGCGCGTGG TCGACGAAGT GCTGGCACAA
TGGGGCGGAC TCGATCTGCT GGTCAATAAT GCAGGCATCT GGGGACCAAC GCCGGTCGGG
AGCGTCTCCG AAGCGCGCTG GGATGAGTTG CTGAACACCA ACCTGCGCAG TATGTTCTTC
ATCGCGCAGC GCGCCGCCGA TGCGCTACGC GCAGCGAGCG GTTCCATCGT CAACATCGCC
GATGTTGGCG TCGAGCGGCC CTGGCGCAAC CATACGCCCT ATCTGGTCAG CAAAGGCGGC
GTTGTCGCAC TGACCAGGGC GCTGGCGAAA GACCTGGCGC CTGAAGTGCG GGTCAACGCA
ATCGCGCCCG GTCCAGTGCT CCTCCCCGAC GACTGGAGCG CCGAACAGGC TGCACAGGTC
GCACGCACAA CGCTACTGCG GCGCGTTGGC AGCCCCGACG ACATTGCCGG CGCAGTGCTC
TATCTCGCAC AAGCCGGGTA TGTGACCGGC GTTACGCTGC CGGTAGATGG GGGACACCTG
CTCCACTGA
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| Protein sequence | MSLHGKAALV TGGARRLGRA IALALGRAGM RVAIHYHASA SAAEEVLAEL RATGASCIAI
PGDLSRTADC ERVVDEVLAQ WGGLDLLVNN AGIWGPTPVG SVSEARWDEL LNTNLRSMFF
IAQRAADALR AASGSIVNIA DVGVERPWRN HTPYLVSKGG VVALTRALAK DLAPEVRVNA
IAPGPVLLPD DWSAEQAAQV ARTTLLRRVG SPDDIAGAVL YLAQAGYVTG VTLPVDGGHL
LH
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