| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3865 |
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| Symbol | |
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| ID | 5541369 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 5052569 |
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| End bp | 5055151 |
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| Gene Length | 2583 bp |
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| Protein Length | 860 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640895974 |
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| Product | hypothetical protein |
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| Protein accession | YP_001433919 |
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| Protein GI | 156743790 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4745] Predicted membrane-bound mannosyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.460325 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGCTGGC TGTCTCTTCA ATCCGCTCGC ATCACCTCTT CTGTTGTACT CGATAGCGTC
CTTCTGTTGT TGCTGGCGAT CCTGCCGCTG ATCCTCGGCG CACGCCTGGC GCGGCTGGAT
CAGCGTCTAT CGGTCGAAGA TTCGAACGCG CGCCGCGTAC TGGTCGGTTT TTACGATGTC
GAGCGCAATC CGACCGATCT CTTCCGTTGG TCGCGCCCCG AGGCGGCGCT GTTTCTCTTT
GGCTTCGACG GACGACCGGC GCGGGTGATG GTGCGTCTGG CCGCGCCGCG CGACACTGCC
GATCCGCCGG TGCTGTCGGT CAGTATGCGA GGGCGCCCGG TCGGCGCTTT TGCGGTTGCA
CCCGGTTGGC GGTGCTATTA TCTGCTGACG CCAACCGATC CGGCTGGCGA TACGCCGCTG
CTGTTGCGTA CTGCTGCCTA TCGTCCGCCT GACGATGGGC GTGATCTCGG CGTGGCGCTG
GCGGAGTTCG CGGCATGGCC GATCACCGGT TCTGCCTGGT TGCCGCCGCC GATACGCACG
ATCTTTCTGG TTTCATTCCC TTTTCTGATC TGGCTGATCT TCGTCTGGCA CGCGCCGCAC
CGCGCATCCG GCGCAACGCT GCTCTACCGG AGCACTGTCG CGTTGCTGTC GATAGCAGGG
GGGGGCGCCG CTGCTTTTCC GGCAGAGGCC GGGTATCTGC TCCCAACCGT TGGCTGGCCC
TGGTGGCCCC TGCTGCCGCT GGCGCTGGCA CTCGCCTGGC GACCGGTGCG CCTGTTGTTG
GCTCGCACGG CGAAGCGTCT GCGCGCAACA GGCATATCGG CTGCGTGGGG GGGCGCTGCG
CTGGCGCTGG CGCTGATCGT TGCCCTGCGT CTGGGATTGC CGCCACTTGC TGGGATGAGC
GGTCTGGTCG CGGCAGTGGC GCTGACGATT CTTGCACTGT ACCGGGATGA GGGATTGACG
TTCCCTGCTG AGCAATCGAT GCAACGCAAT GAAGTGCTGG CGCTGGCAGT CGTCACTGTG
GCAGCGCTGG CGCTCCGCCT CTATCGCCTT GACGATCTGC CCTCTGGAAT GTGGCGCGAT
GAGGCGCGCC ATGGTCTGCT GGCATTACGG ATCTGGAGCG ACTCCACGTA TCGTCCGGTC
TATGTAGTGG CCGGCGCAGA TCTGCCAGCG CTTCTCTTCT ACCTGATGGC GCCGGTGCTG
GCACTCACCG GACCAGGGGT TGGCGCGGCG CGTCTGGTCA GCGCGCTGGC AGGCGCATTG
ATGCCGCTGG CGCTCTGGTG GGCAGCGCGT CCAATCCTGG GGGGGCGGGC TGCGCTCTAC
GGCGCTGCGT TCCTTGCCTG GGCATCCTGG GGATTGAGTA TGAGCCGCTG GGCATTCCCT
GCAACGCTCG ATCATCTGCT CGAACTCACT GCCATTGGGG TTATGTGGCG GGCGCTGGGG
CAACCTGCAC CCTGGCGCGC TGCCGCTGGA ATGGCGCTGG CGGGCGCACT GGCGGCGCTG
GCGGCGTATG CCTATCACAC CGGACGCCTC GCACCGCTGG TCTTTGTGGC GCTGACTGCG
GTACGCCTTG GACGCGATGC GGGCGCATGG CGCCGGGCGC TGCCTGCGCT TGGCGCGGCG
GCGACGGCTG GGGTGATCGT GCTGTTGCCG CTCCTTGCGT TCATCGCCGG CGATTTCGAG
GGGTACAACC GCCGCACCGG AATGGTTGCG ATCAGCAACG CTCAGAACCT CGAGAAACGC
ACGGTGGCGT TGGTGCTGGA CAATATCGCG CGCTATCTGG GGATGTGGCA TATCGCCGGC
GATCCCAACG GGCGTCATCA CGCCCCTGGT GCGCCAATGC TCGACCCACT GGCAGGGACA
TGCTTCGCGC TCGGTGTGGG TCTGGCGCTT GTTGGCCGGC GCTCGAAAGC GTTCGTTCCC
CTGCTCTGGC TGGGTCTGGC GCTCATTCCG GGTGTTTTGA GCACGAATGC ACCTCATGCC
ATGCGCTCGC TTGGCGCGCT TGCGCCCTCG TGTATGCTGG CAGGCATGGC GCTCGATACG
CTTATACGAG CAACAAACAG CGCTGGCTCT CACCTGTGGC GACGCATCGC ACCAGCAGTC
GTTACAGGAA CGCTGGTCGT CAGCCTGTCA TTCAACGCCT GGCTGTATTT CGTCGCAATG
CCTGGCAATC CGGCGGTCTA CAATGAGTTC GATCAGACCG AGACGGCAGT AGGACGGGTT
GCGCGGATGG CTGCGACATC GAATGATCCG CGTTTGAGAT CTATCCGGGT GTTTGTAGAT
CGGCGATTGA TCGAGCGGGA TACGGTGCGT TTTCTGACTG GCGATCTCAT CATTGGCGTC
TTCGATGGCG TCCGCCTGTC GGAAACGGTC ACCGGCGATG CGCTGCTGAT CCTGCCGCCG
GATGTGTCCG ATGGGGATCG CAAGGCGGCG CTGGAGGCGC TCGGTCTCGC AGCGCATGAA
CTGACGCCGC CGCTGTTGCC GAATGGTGAA GCGCCGCTCT TCCTGGCGTA TGGCGTGGGA
GATGGGACCC AGCGGCTATT GAACGAGACC TTTTCGCCAG ACTCCCTGCC CGGCGGCAAA
TGA
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| Protein sequence | MRWLSLQSAR ITSSVVLDSV LLLLLAILPL ILGARLARLD QRLSVEDSNA RRVLVGFYDV
ERNPTDLFRW SRPEAALFLF GFDGRPARVM VRLAAPRDTA DPPVLSVSMR GRPVGAFAVA
PGWRCYYLLT PTDPAGDTPL LLRTAAYRPP DDGRDLGVAL AEFAAWPITG SAWLPPPIRT
IFLVSFPFLI WLIFVWHAPH RASGATLLYR STVALLSIAG GGAAAFPAEA GYLLPTVGWP
WWPLLPLALA LAWRPVRLLL ARTAKRLRAT GISAAWGGAA LALALIVALR LGLPPLAGMS
GLVAAVALTI LALYRDEGLT FPAEQSMQRN EVLALAVVTV AALALRLYRL DDLPSGMWRD
EARHGLLALR IWSDSTYRPV YVVAGADLPA LLFYLMAPVL ALTGPGVGAA RLVSALAGAL
MPLALWWAAR PILGGRAALY GAAFLAWASW GLSMSRWAFP ATLDHLLELT AIGVMWRALG
QPAPWRAAAG MALAGALAAL AAYAYHTGRL APLVFVALTA VRLGRDAGAW RRALPALGAA
ATAGVIVLLP LLAFIAGDFE GYNRRTGMVA ISNAQNLEKR TVALVLDNIA RYLGMWHIAG
DPNGRHHAPG APMLDPLAGT CFALGVGLAL VGRRSKAFVP LLWLGLALIP GVLSTNAPHA
MRSLGALAPS CMLAGMALDT LIRATNSAGS HLWRRIAPAV VTGTLVVSLS FNAWLYFVAM
PGNPAVYNEF DQTETAVGRV ARMAATSNDP RLRSIRVFVD RRLIERDTVR FLTGDLIIGV
FDGVRLSETV TGDALLILPP DVSDGDRKAA LEALGLAAHE LTPPLLPNGE APLFLAYGVG
DGTQRLLNET FSPDSLPGGK
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