| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3861 |
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| Symbol | |
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| ID | 5541365 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 5044427 |
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| End bp | 5045839 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640895970 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_001433915 |
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| Protein GI | 156743786 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.833045 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.682317 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCAAC GATCAATCAC CACTCGCGCG CTAGAGAGCG TCGCTGCGCT GACCGCCAGC
ACATGGCCCC TTATGGCGCG GCTACTTCCC GAACGTATGG AGTTTGACGA TACCCTGTCG
ATCTGGCACG CCGGAACGCC GGACTATCAA CCACGCGCAC CACTCAGGGG CGAAATTACC
GCCGACCTGG CGATCATCGG CGGCGGCTTC ACCGGCGTGA GCGCGGCATA TCACATCGCG
CAGCGTTTCC CGCAGCAGCG CATCGTCCTG CTCGAGGCGA CGTCGCTGGC GAATGGCGCC
AGTGGGCGGA ATGGCGGTCT GGCGTTGAAC TGGATCAATG GCATCGATAC CAGCGATCCC
GAACTGACGC AGAAGGTCTA TCAACTGACC AGCGCCGGGT TGTGCGCGAT ACGCACCCTG
ATCGAGCGCC ACCGTCTGTT GGTCGATCAT CGCTTCGATG GCACGTTGAC ATTGCACACC
AGCCCGAAGC GCGCCGAAGC AGCGCATGCG GAAGCCGAGT ATCTGCGCGC GTTGGGTATT
CCGGTACAAT TTCTGCACCG CAACGAACTG GCATCACACT TCGATGCGCG CGGCGTCTAT
GGCGCAACGC TCGAACCAGA GACCGGGCAG ATCAACGGGG CGCAGTTCGT TCGTGAGTTG
CGCCCGATTC TGGAAGCGCG CGGCGTTGCA GTCTATGAGC AGACGCCAGT GCTCCGCCTG
CAAACCGGTC GGATCATTCG CCTGACCACA CCGCAGGGGG AGGTGCATAC GCCCGCCGTT
GTGCTGGCGA CGAACGGGTA TACGAGCAAA CTGGGACTAT TCCGTGATGC GCTGTTCCCG
CTCCACTCGA GCGTCTTCGC CACTGCGCCG CTGACCCCAG AGCAACGGCA GCAGTTGGGT
TGGCGGGCAT TCGCCGGTTT TGCCGATGAC CTGGATCGCA TTTCGTATGG GTCGCTGACG
CTTACGGGAC ATCTGATATT CGGCGGCGGC AGCAATCAGG CATACGCCTA TCTGTTCAAC
AATCGCACCC GCCTGCCGGC AGAGAGCGCT GTTGCCCGCC GCGCGCAGAC GGCGATTGCG
CGGACGCTGG CAGGGTACTT TCCGTCCACC GCGACACTAC CGATAGTTCG CCGCTGGAGC
GGGGTGCTGG GCATTACGCT AAACCGCCAA CCGCTCTGGG GACGGTGGGG CGAGGAGAGG
AACATCTACT ACGCGCTGGG GTACTCCGGT CACGGCATTA CGCTCGCCAA CCTTGCCGGC
GAGTTCATTG CCGACCTGTA CGGCGGGGAT GATAGCCGCT GGCGGTGGTT GCCGTTCTAT
CAGAGCCGCT ACCCGCCGAT ACCGCCAGAG CCGTTCCGTT GGCTGGGGTA TCAGGTGTTC
ACCAGACTGA CCGGACGATC GCCACGAGTG TGA
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| Protein sequence | MTQRSITTRA LESVAALTAS TWPLMARLLP ERMEFDDTLS IWHAGTPDYQ PRAPLRGEIT
ADLAIIGGGF TGVSAAYHIA QRFPQQRIVL LEATSLANGA SGRNGGLALN WINGIDTSDP
ELTQKVYQLT SAGLCAIRTL IERHRLLVDH RFDGTLTLHT SPKRAEAAHA EAEYLRALGI
PVQFLHRNEL ASHFDARGVY GATLEPETGQ INGAQFVREL RPILEARGVA VYEQTPVLRL
QTGRIIRLTT PQGEVHTPAV VLATNGYTSK LGLFRDALFP LHSSVFATAP LTPEQRQQLG
WRAFAGFADD LDRISYGSLT LTGHLIFGGG SNQAYAYLFN NRTRLPAESA VARRAQTAIA
RTLAGYFPST ATLPIVRRWS GVLGITLNRQ PLWGRWGEER NIYYALGYSG HGITLANLAG
EFIADLYGGD DSRWRWLPFY QSRYPPIPPE PFRWLGYQVF TRLTGRSPRV
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