| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3859 |
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| Symbol | |
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| ID | 5541363 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 5042689 |
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| End bp | 5043765 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640895969 |
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| Product | transposase IS4 family protein |
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| Protein accession | YP_001433914 |
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| Protein GI | 156743785 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.631601 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAACG ACAAACAACT CCTTGACCTG TACAGCGACT ATTTGATAAG CGCCTTCGGA
CAAACCACGG CGACAGGGCT GTCATCCCTA TTGGATGGTG AAATCAGCCA TGACCGAGTG
CAACGCTTGC TGGCAGGGAA AGAACAAACC TCGGCGGATT TGTGGCGGCT TGTCAAGCCA
CATGTGCGCC AGATTGAAAG CGAAGACGGC GTGGTAATTG TGGATGACAG TATTGCGGAA
AAACCATACA CCGACGAGAA CGACATCGTT TGCTGGCACT ACGATCATTC CCAGCAAAGA
ACCGTCAAGG GCATCAACTT TGTGACCTGC CTATATCACA GCCAAGGCGT ATCGTTGCCC
GTTGGGTTCG AACTGGTTCG GAAAACAGAA CGCTACACCG ACCCGAAGAC GGGAAAGGAA
AAACGTCGCT CGGATAAAAC CAAGAATGAA ATGTACCGAG ACCTCCTACA ACAAGCCGTC
AAAAACCAGA TTCCGTTCAA ATATGCGCTC AACGATATCT GGTTTGCTTC CGCCGAAAAC
ATGAACTTTG TCAAACTCAC ACTCAAAAAG GAGTTCGTTA TGCCACTCAC AGGCAATCGC
AAAGTGGCGC TGAGTGTGAA TGCCAAGCAG CCGGGACGTT ATCAGCGAGT GGACACGCTG
GAACTGGAAC CGATGAAACC TGTCACGGTG TATTTGGAAG GCGTGGGGTT TGCGCTCCTT
CTCATCAAAC AAGTCTTCAC AAACGAAGAT GGCTCGACAG GCATCCAATA TCTGGTCGCC
AGCGATACCA CACGAGACGG TAACGGGATT GCCGCAATCT ATCACAAACG ATGGAACGTG
GAACCCTATC ACAAGTCGCT CAAACAGAAT GCTTCGCTGG AGAAGTCACC CACCCAAACG
GTGACAACTC AGACCAATCA TTTCTTTGCG GCTCTGTGCG GTTACATCAA ACTCGAACTG
CTCAAAGGCG CCACCAAACT CAATCATTGT GCGCTCAAAT CCAAACTGTA CTTGCACGCT
ATTCATGCCG CTTATGCCAA GTTGCAGGAA CTCAATCCTG TTCAACTGGC TGCGTAA
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| Protein sequence | MKNDKQLLDL YSDYLISAFG QTTATGLSSL LDGEISHDRV QRLLAGKEQT SADLWRLVKP
HVRQIESEDG VVIVDDSIAE KPYTDENDIV CWHYDHSQQR TVKGINFVTC LYHSQGVSLP
VGFELVRKTE RYTDPKTGKE KRRSDKTKNE MYRDLLQQAV KNQIPFKYAL NDIWFASAEN
MNFVKLTLKK EFVMPLTGNR KVALSVNAKQ PGRYQRVDTL ELEPMKPVTV YLEGVGFALL
LIKQVFTNED GSTGIQYLVA SDTTRDGNGI AAIYHKRWNV EPYHKSLKQN ASLEKSPTQT
VTTQTNHFFA ALCGYIKLEL LKGATKLNHC ALKSKLYLHA IHAAYAKLQE LNPVQLAA
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