Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_3858 |
Symbol | |
ID | 5541362 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 5041587 |
End bp | 5042660 |
Gene Length | 1074 bp |
Protein Length | 357 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640895968 |
Product | anti-sigma-factor antagonist |
Protein accession | YP_001433913 |
Protein GI | 156743784 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGTTACT CATATCTGCA AACCGGCGAT CCTGGAGATC TTGAGGAGGG CGCCGAACTG CTTGAGCGCC TGCAAAGGAT GGTGGCTCAG CTGCGCACGT CGGACCATAT CTACGGCGAT TTCCAGGAAG AAGTCGCCGA GCAGCACATA CCGGTTGTGG ATCAGGGCAG GGCGCTTCTG CAAGCAGTAC AGGACCTGCA CCATCGGCTG TCGTTCGGGA TCGATACGCC GACCGATGCA CAGCGTGAAG CGTTTTATCA GGAGATCGAA CGAATCGAAG AGCAGCGTGA GACATTCACG AAACAAGCGA ATGCGCATCT TGCAGGCATC CGCACTGTTG CGCAGCAGCA TATTGAAGGC GATGTCAGGC TCACCTTCGT TGGCATCGCC ATTGCACTGG CAGCGATGGT CGCATTGACC ATAGGCGTGC TCTGGTTGAT TGAGCGACAT ATTGTGCGTC CGCTACGCTC GATCACCAAC GCGGCAAGCC GCCTTGCGGA GGGACGTCTG GATGGCGAGT TGGCAATTAC GAGCAACGAC GAGATCGGCG TGCTGCAACA GACGTTCAAC CGCATGGCAG CGACGATCCG GCGGCAAACC GGCGATCTTG AAATACACTA CCGGCAGGTG ACACAGGCGC GTGACGCGCT CGAAGCGGCA CACAGGCAGG CGGTCGAACA ACTGGCGATT ATTCAGCGGC AGCAGGAAGC CATTCGCAAA CTGAGCGTTC CGGTGCTGCC GGTGAGCCGT GATACCCCGG TGATGCCGCT GGTCGGCGCG CTCGACAGCG CCCGCCTGAT CCAGGTGCAG GAGCAGGCGC TGGAACGGCT TGCAGCAACC CGCGCTCGTC GCCTGTTGCT CGACATCACC GGTGTGCCGA TTGTAGACAG TCATGTGGCG CAGGGGCTGA TTCGCGTCGT TCAGGCGGCG CATCTTCTCG GTGCAGAGGT GATGTTGATC GGCATTCGTC CTGAAGTGGC GCAGTCCATT GTTGGTTTAG GCATCAGCCT GAGCAATATT CGAACCTGTA GCGATTTGCA GAGCGCACTG GCGCAAAAAG GAGGACGCTT GTGA
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Protein sequence | MSYSYLQTGD PGDLEEGAEL LERLQRMVAQ LRTSDHIYGD FQEEVAEQHI PVVDQGRALL QAVQDLHHRL SFGIDTPTDA QREAFYQEIE RIEEQRETFT KQANAHLAGI RTVAQQHIEG DVRLTFVGIA IALAAMVALT IGVLWLIERH IVRPLRSITN AASRLAEGRL DGELAITSND EIGVLQQTFN RMAATIRRQT GDLEIHYRQV TQARDALEAA HRQAVEQLAI IQRQQEAIRK LSVPVLPVSR DTPVMPLVGA LDSARLIQVQ EQALERLAAT RARRLLLDIT GVPIVDSHVA QGLIRVVQAA HLLGAEVMLI GIRPEVAQSI VGLGISLSNI RTCSDLQSAL AQKGGRL
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