| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3854 |
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| Symbol | |
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| ID | 5541358 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 5037528 |
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| End bp | 5038532 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640895964 |
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| Product | succinylglutamate desuccinylase/aspartoacylase |
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| Protein accession | YP_001433909 |
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| Protein GI | 156743780 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3608] Predicted deacylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.795222 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCAA CGCAGATCGT GACCATGATC GATTTCGAGA AGCCCGGCAA GCAAGTGGGA
CAGTTGGCGA TTCCACAATC AACCAACACA TCGGGATGGG CAACCGAATA TCTGCCCATT
GCCGTGATCA ATGGCGCACC CGGACCAACG GCGCTGTTGT TCGGCGGCAA CCATGGCGAT
GAGTATGAAG GACCGGTGAC GCTCCTGAAC ATGGCGCACA CCCTCGAACC AGACAATCTC
TGCGGGCGTG TCATCATCGT TCCGATGCTG AACCGTCCGG CGCTTGCCGC CGGAACCCGA
CTGTCGCCGC TCGACGGCAA GAACATGAAT CGGGTGTTTC CGGGACGCGC CGATGGAACG
ATCACCGAGA TGATTGCTCA TTACGTAACG ACGGTGCTTT TCCCACTGGC GGACCTGGTG
ATCGATATTC ATTCCGGCGG ACGGTCGGCG CACTTTCTGC CGCTCGTCAG CATGCACCAT
GTTCCCAACC ACGAACAATT GCGATCCATG ATCGATCTGG CGCTGGCATG GGGTGCGCCA
TATGTGCTGC TCTACCGGGA TGTCGGCGGA ACCGGGCTGC TCCCCGGCGA AGCCGAACGC
CTGGGAAAAC TGACCCTTGG CACTGAAATG GGCAGCGCCG CGCAGTTTGG CGTCGATATG
CTCAGCCTGA CGGAACGCGG CGTGCGCAAT GTGTTGCGTC AGGCACGCAT CCTGACCGAT
CAGACGCCCG ACCCGCCGGC GCCCGCGAAG ATTATGGCTG CCGATCAGTA TGATGATTAC
ATCATGGCGC CGGTAAGCGG CATCTTCGAA CCTTTCGTCG AAATGGGCGC GTGGATGGTC
GCGGGACAGG CGATCGGGCA GATCCATTCT ATCGAGCAAC CCTTCGCTTT GCCAACGCTG
GTGTACGCCA GAACAGACGG CATGCTGATC AGCCGGCGCG CGTTTCCCCT CGTTCGCCAG
GGCGACTGCC TTGCCACACT TGCACGCCCG TTTCACCTGC CATAG
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| Protein sequence | MSATQIVTMI DFEKPGKQVG QLAIPQSTNT SGWATEYLPI AVINGAPGPT ALLFGGNHGD
EYEGPVTLLN MAHTLEPDNL CGRVIIVPML NRPALAAGTR LSPLDGKNMN RVFPGRADGT
ITEMIAHYVT TVLFPLADLV IDIHSGGRSA HFLPLVSMHH VPNHEQLRSM IDLALAWGAP
YVLLYRDVGG TGLLPGEAER LGKLTLGTEM GSAAQFGVDM LSLTERGVRN VLRQARILTD
QTPDPPAPAK IMAADQYDDY IMAPVSGIFE PFVEMGAWMV AGQAIGQIHS IEQPFALPTL
VYARTDGMLI SRRAFPLVRQ GDCLATLARP FHLP
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