| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3826 |
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| Symbol | |
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| ID | 5541329 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 4999461 |
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| End bp | 5000939 |
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| Gene Length | 1479 bp |
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| Protein Length | 492 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640895936 |
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| Product | GAF sensor signal transduction histidine kinase |
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| Protein accession | YP_001433882 |
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| Protein GI | 156743753 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.873199 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACAAA AGTCTGTCTC TCCGACACGG CACACCAGGC GTTCTGTCAA TGGTCAACCG
GACGATATTG CGCATCTGCG AGCTGAATTG ACGGCAGCAT ATGCGCGAAT TGCCGAACTC
GAGGCGCAGA TGGCAGTATC CGTACAGCGC GCGAACCTGG CAAATGAGCG CCTGAATGCC
ATTCTCACGA TCAGCGCCGC ATTGCTTATC ACGCACGAGA TCGATACTAT CCTGCAATTG
GTGGTGCGCG AAGCAGTGCA ACTGTTCCCC GGCGCGCACG GCGCACTCCT GTTTCTTGCC
GATCAGTCAG GTTTACGCCT GCGGCTTGTT GCGAGCAGCA GCGGTAAGAC GACGGGACTC
TCCTTGCGAC CCGGTCAGAG TCTGGCAGGG CGCGCCTTCC TTTCGCCACG TGCGATGTTA
CTCGCCGGTC CAGAACTTGA AGCAACACTG AGTGAGTTGA GTGAAGCGCA GCTGGCTCAG
AAGAAAAAAG TTCTGGGATT CTGGCCCCCT GGCAGCGCTC TGATGGCGCC GTTGCGCATC
GAAGATACGC GACTGGGCGC GCTCGTGCTG TATGGCAATC AAAATCCACA CCTGACCCAT
CCGCGTGATA TTCCCTTCAT TCAGGCGCTG GCAGACCTGA CGGCCGTTGC CATTGCGGAA
CATCGTCAGC GCGCACGCGC AGCGGCGCTC CAGCAGGACC TCGATCAGAC GCAGTCACTC
CATGCCGAGG CGCAGGCGCG GCTCAATGCG GCGCAGGCGC AACTGTTGCA AAGCGCAAAA
CTGGCTGCCG TCGGCGAACT GGCGGCATCG GTGGCGCACG AGATCAACAA TCCGCTCTAC
GCGGCGCGCA ACAGTCTGTA CCTGGTGGAA CAGGATATTC CGCCCGATAC GCCTCAGCGC
CATTTCCTTA CAATTGCCCA AAACGAACTT GGTCGCATCG CCCGCATTAT TACCCGCATG
CGCGATTTCT ATCGTCCGGC GCGCGATGAA TTGGAGCCAA CGGAGATCAA CGACCTGCTG
GCGGAAACGA TCGAACTGGT GCAGACCCAC CTGCGGCACG GGCAGGTGAC GGTGACGGTC
GACTTCTGTC CCAACCTGCC GCGCCTGATT GCGCATCCTG ATCAGTTGCG CCAGGTGTTT
CTTAATCTGA TGCTCAACGC ATGCGACGCC ATGCCGCACG GCGGGCAGTT GCACATTACC
ACCGAACTCT CTTGCGAGAA TGATGCTGAC GCGCAGTATG TCGTTATCTC AATCCGCGAT
TCGGGTACGG GGATCAACCC GGAGCACATG CCGCACCTCT TCGAGCCATT TTATACGACA
AAGCCGCAAG GCACCGGCCT TGGGTTAGCG ATCAGCGCCC ATATTGTGAC GCAGCACGGT
GGTCATATTC AGGTCGAAAG CGAACCCGGC GCCGGAAGCA CCTTCACGGT CCTGCTTCCG
GTGGATCGCG GGGAAAAGGA AGAAGGCGTC ACGGATTAG
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| Protein sequence | MKQKSVSPTR HTRRSVNGQP DDIAHLRAEL TAAYARIAEL EAQMAVSVQR ANLANERLNA
ILTISAALLI THEIDTILQL VVREAVQLFP GAHGALLFLA DQSGLRLRLV ASSSGKTTGL
SLRPGQSLAG RAFLSPRAML LAGPELEATL SELSEAQLAQ KKKVLGFWPP GSALMAPLRI
EDTRLGALVL YGNQNPHLTH PRDIPFIQAL ADLTAVAIAE HRQRARAAAL QQDLDQTQSL
HAEAQARLNA AQAQLLQSAK LAAVGELAAS VAHEINNPLY AARNSLYLVE QDIPPDTPQR
HFLTIAQNEL GRIARIITRM RDFYRPARDE LEPTEINDLL AETIELVQTH LRHGQVTVTV
DFCPNLPRLI AHPDQLRQVF LNLMLNACDA MPHGGQLHIT TELSCENDAD AQYVVISIRD
SGTGINPEHM PHLFEPFYTT KPQGTGLGLA ISAHIVTQHG GHIQVESEPG AGSTFTVLLP
VDRGEKEEGV TD
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