Gene Rcas_3823 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_3823 
Symbol 
ID5541326 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp4997170 
End bp4998204 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content59% 
IMG OID640895933 
Productaminoglycoside phosphotransferase 
Protein accessionYP_001433879 
Protein GI156743750 
COG category[R] General function prediction only 
COG ID[COG2334] Putative homoserine kinase type II (protein kinase fold) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGAAAT CAACCGACAT CACACGTGTG CTATCATGCT ACGATTTGGG ATCAATCGAA 
GGAATCGCTG CTACAGGTCA TGGGTTCGTC AATGAGACCG CGATTGTCGT CACCCGGCAG
GGCCGGTTTG TGGTGCGCCG CAACCACTAT CGCTTCTCAC TGGCTTCGGT GTGCTATCGT
CATCGCCTGA TCGATCATCT CTGTCAGCGG TCGTTTCCGA CAGCCCGTCT GATCCAAAAC
AAGAACGGCT CAACAGTGAC GATCATCGAC GGACGGATCT ACGAAGTCCA GGAGTATGTG
CATGGGACCG ACTTCGATCC GGGTTGTCCC GGACAAGTCA TGGAAGTTGG CGCGACCCTT
GCCTGCTATC ACCAGGCGGT TTTGGATCTG CCGCCGCCAG AGGATGGAAC ATTACCCCGG
TATGCGCCAG CACGCATTAC ATCCCTGACC GAAGGTTTGT ACGAACGCGA CGTGATGGGA
GAATTGCATG CCGATCTTGC CTGGTACGAC GGGCGAGCAG CGGCATTACG CGCCATCCTG
TCCGATCACA CCTACGAGGC GTTGCCGCGA GTCCTGATCC ACGGCGATAT GCATCCCGAT
AATGTGCGAT TCGCCGGCGA CCGGGTCGTG GCGCTGCTCG ACTTCGATCA GGTCGAACGG
GATGCGCGCA TTGTCGATCT CGCCGATGCG CTGGTTGGAT TTACCACCAG GGTGCTGCCG
TCGGAAGCAG CTTCATGGGG TGTGTTTCGC GGGCCGTTGG ACATTCCACA AGCAGTTAAC
CTGGTGTGCA GTTATAGTCG CGCTGCGCCG CTGCTGCCAG GCGAAGTCGC TGCGTTGCCT
GCGCTGATCG AAGTGCTCTG GTTGCGCGGC GAACTCGGTC GGGTCATCTC AACACCCGAG
GGAGCGCCGG ATTACCACGC AGCCGTGCTG GCGCAGGGCA GGCGCCTCTC GGAATGGATG
CAACAGCATG CGCCAATCTT GATCAATCGC TGGAGCGAAG CGGCGATTGG TCGCATAGGC
GCGCTCGCGG CATGA
 
Protein sequence
MLKSTDITRV LSCYDLGSIE GIAATGHGFV NETAIVVTRQ GRFVVRRNHY RFSLASVCYR 
HRLIDHLCQR SFPTARLIQN KNGSTVTIID GRIYEVQEYV HGTDFDPGCP GQVMEVGATL
ACYHQAVLDL PPPEDGTLPR YAPARITSLT EGLYERDVMG ELHADLAWYD GRAAALRAIL
SDHTYEALPR VLIHGDMHPD NVRFAGDRVV ALLDFDQVER DARIVDLADA LVGFTTRVLP
SEAASWGVFR GPLDIPQAVN LVCSYSRAAP LLPGEVAALP ALIEVLWLRG ELGRVISTPE
GAPDYHAAVL AQGRRLSEWM QQHAPILINR WSEAAIGRIG ALAA