Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_3823 |
Symbol | |
ID | 5541326 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 4997170 |
End bp | 4998204 |
Gene Length | 1035 bp |
Protein Length | 344 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640895933 |
Product | aminoglycoside phosphotransferase |
Protein accession | YP_001433879 |
Protein GI | 156743750 |
COG category | [R] General function prediction only |
COG ID | [COG2334] Putative homoserine kinase type II (protein kinase fold) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGAAAT CAACCGACAT CACACGTGTG CTATCATGCT ACGATTTGGG ATCAATCGAA GGAATCGCTG CTACAGGTCA TGGGTTCGTC AATGAGACCG CGATTGTCGT CACCCGGCAG GGCCGGTTTG TGGTGCGCCG CAACCACTAT CGCTTCTCAC TGGCTTCGGT GTGCTATCGT CATCGCCTGA TCGATCATCT CTGTCAGCGG TCGTTTCCGA CAGCCCGTCT GATCCAAAAC AAGAACGGCT CAACAGTGAC GATCATCGAC GGACGGATCT ACGAAGTCCA GGAGTATGTG CATGGGACCG ACTTCGATCC GGGTTGTCCC GGACAAGTCA TGGAAGTTGG CGCGACCCTT GCCTGCTATC ACCAGGCGGT TTTGGATCTG CCGCCGCCAG AGGATGGAAC ATTACCCCGG TATGCGCCAG CACGCATTAC ATCCCTGACC GAAGGTTTGT ACGAACGCGA CGTGATGGGA GAATTGCATG CCGATCTTGC CTGGTACGAC GGGCGAGCAG CGGCATTACG CGCCATCCTG TCCGATCACA CCTACGAGGC GTTGCCGCGA GTCCTGATCC ACGGCGATAT GCATCCCGAT AATGTGCGAT TCGCCGGCGA CCGGGTCGTG GCGCTGCTCG ACTTCGATCA GGTCGAACGG GATGCGCGCA TTGTCGATCT CGCCGATGCG CTGGTTGGAT TTACCACCAG GGTGCTGCCG TCGGAAGCAG CTTCATGGGG TGTGTTTCGC GGGCCGTTGG ACATTCCACA AGCAGTTAAC CTGGTGTGCA GTTATAGTCG CGCTGCGCCG CTGCTGCCAG GCGAAGTCGC TGCGTTGCCT GCGCTGATCG AAGTGCTCTG GTTGCGCGGC GAACTCGGTC GGGTCATCTC AACACCCGAG GGAGCGCCGG ATTACCACGC AGCCGTGCTG GCGCAGGGCA GGCGCCTCTC GGAATGGATG CAACAGCATG CGCCAATCTT GATCAATCGC TGGAGCGAAG CGGCGATTGG TCGCATAGGC GCGCTCGCGG CATGA
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Protein sequence | MLKSTDITRV LSCYDLGSIE GIAATGHGFV NETAIVVTRQ GRFVVRRNHY RFSLASVCYR HRLIDHLCQR SFPTARLIQN KNGSTVTIID GRIYEVQEYV HGTDFDPGCP GQVMEVGATL ACYHQAVLDL PPPEDGTLPR YAPARITSLT EGLYERDVMG ELHADLAWYD GRAAALRAIL SDHTYEALPR VLIHGDMHPD NVRFAGDRVV ALLDFDQVER DARIVDLADA LVGFTTRVLP SEAASWGVFR GPLDIPQAVN LVCSYSRAAP LLPGEVAALP ALIEVLWLRG ELGRVISTPE GAPDYHAAVL AQGRRLSEWM QQHAPILINR WSEAAIGRIG ALAA
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