| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3813 |
|---|
| Symbol | |
|---|
| ID | 5541315 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | + |
|---|
| Start bp | 4983561 |
|---|
| End bp | 4984823 |
|---|
| Gene Length | 1263 bp |
|---|
| Protein Length | 420 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640895923 |
|---|
| Product | glutamine--scyllo-inositol transaminase |
|---|
| Protein accession | YP_001433870 |
|---|
| Protein GI | 156743741 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTTTAC GATTGGCAAT CGACGGCGGC GAGCGCGCGG TTAAGACCCC GCTGCCACCC
ATGTTCCCCG GCGGCATGCG AATCGGCGCC GAAGAAGAGC AGGCGGTGCT CAACGTCCTG
CGAAGCCGGC GCCTCTTCCG CTACTATGGT CCGGCGCCGG GTCCTTCGCA AACCGACTTG
TTCGAGCAGG AATTTGCTGC GCATATGGGC ACGGCATACG CTCTGGCAGT CTCGTCTGGC
ACAGCCGCGC TCATGTGCGC AATGGCAGCG CTCGGGGTCG GACCCGGAGA CGAAGTGATC
GTTCCGGCGT ACACCTGGAT TGCAACCGCC TCAGCAGTTG TGGCGCTTGG CGCAGTTCCG
GTCATTGCCG AGATCGATGA ATCGCTGACG ATCGACCCTG CGGATGTGGA ATGCAAAATC
ACACCCCATA CCCGCGCTAT TACGGCAGTG CACATGCGCG GCTCGCCATG TCGGATGGAT
GCGTTGACCG AGATCGCGCA CCGGCACAAT GTATCATTGA TCGAAGATGT GGCGCAGGCG
GCAGGCGCAA GTTTTCGCGG GAAACGTCTT GGCGCCTGGG GCGATGCCGG CGCATTTAGC
CTGCAATTCA ACAAGATCAT AACATCAGGT GAGGGTGGCG TGGTGCTGAC CAACAGCCAT
GCCCTGTACA AGCGCGCCAT TATGTATCAC GATGTCGTTG GCGGATACCG TCACCACATT
CCGCCCGACG AGATTCTGCC AGGGGTCAAC TTCCGCATGA ACGAACTTCA GGCTGCAATT
GCGCTGGCGC AACTCGGTAA ACTGGAGGGA ATCCTCGCTG ATATGCGTCG CAACCATGCG
GCCATTGTCG AACGCATTGC CGATTGCGCG CGATCAGCGG GCATTCTGCT CCGCCGTCTC
AACGATCCGA CCGGCGACGC GGGACTGGCG CTGGTGCTGC TGCTCCCATC CGCCGAATGC
ACGCGTTGGG CAGTCGATGC GCTGCGTGCT GAGGGGGTTG GGGCAATGGC GTTATATCGC
CCCGATGTTG AGGATTACCA TGTCTACCGT TATTGGGCGC CGATCATGAA CCAGAAGACA
TGGACCGAAC AGGGTGGACC ATGGCGTTGG GCAGCGCGCA CGATCGAGTA TGCGCCTGAT
ATGTGCCCGC GGTCGCTCGA TCTGTTGAGT CGCGCCCTGC ACCTCAATGT CAGCCCCGAT
TTGAGCGAGG CACAGATCGA AGAGGTTGCG ACGGCGTTGA ACAAGGTGCT GGAGGCGCTG
TGA
|
|---|
| Protein sequence | MSLRLAIDGG ERAVKTPLPP MFPGGMRIGA EEEQAVLNVL RSRRLFRYYG PAPGPSQTDL
FEQEFAAHMG TAYALAVSSG TAALMCAMAA LGVGPGDEVI VPAYTWIATA SAVVALGAVP
VIAEIDESLT IDPADVECKI TPHTRAITAV HMRGSPCRMD ALTEIAHRHN VSLIEDVAQA
AGASFRGKRL GAWGDAGAFS LQFNKIITSG EGGVVLTNSH ALYKRAIMYH DVVGGYRHHI
PPDEILPGVN FRMNELQAAI ALAQLGKLEG ILADMRRNHA AIVERIADCA RSAGILLRRL
NDPTGDAGLA LVLLLPSAEC TRWAVDALRA EGVGAMALYR PDVEDYHVYR YWAPIMNQKT
WTEQGGPWRW AARTIEYAPD MCPRSLDLLS RALHLNVSPD LSEAQIEEVA TALNKVLEAL
|
|---|
| |