| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3784 |
|---|
| Symbol | |
|---|
| ID | 5541286 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | + |
|---|
| Start bp | 4955816 |
|---|
| End bp | 4956994 |
|---|
| Gene Length | 1179 bp |
|---|
| Protein Length | 392 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640895894 |
|---|
| Product | N-acylglucosamine 2-epimerase |
|---|
| Protein accession | YP_001433841 |
|---|
| Protein GI | 156743712 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2942] N-acyl-D-glucosamine 2-epimerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.039561 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.0465307 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGCCT CGTATGCAGC ACGCTATCGC GCTCACCTGG AGGAGTCGGT CATTCCGTTC
TGGTTGCAGC ACTCGCTGGA TCACGAGTAT GGCGGACAGT TTACCTGCCT TGATCGCGAC
GGCTCGATCT ACGATACAAA GAAGTACATG TGGTTGCAAG GGCGCGCGGT CTGGATGTTT
TCGCGGTTGT ACAACGAGTT CGACCATCGC CAGGAGTTCC TCGACGCCGC AACGCTCATC
TGCCGATTTA TGCGTCGTTA TGGGCGCGAC CCGCAAGGGC GCGTTTATTT TAGTCTGACG
CGCGAAGGAG AACCGTACTT TTATCAGCGC AAGCCGTATG CGGCGGTGTT CTACATGCTC
GGCTTGCTGG AGTATGCGCG CGCAACCGGC GATCAAGAGT GTCTTAATGA GGCTATCGAG
GTCTTCTGGC AGATCGACCG ATGGATCCGC AATCCGGCGC TGCTCGACCG CCCTGCGCTG
ACGGGCAATC CGCCGGTCAG CAGCCTGGCG AATGTGATGG TGTTGGCGAG CATGGCCATC
GAACTGGCGC GGGTCTCCGA TGATCTGCGC TATGTGCAGG TGATCCGCGA CGCTATGGAT
GGCGTGGTGC GCCATTACGA TCCACAGCGC CGCATTCTCA TTGAACATGT GGCTCTCGAT
AGGCGCGACC TGCGCGCCTG GCCCGAAGGT CGGCTGTTCA GCCCTGGTCA CTCGATTGAG
GTCGCCTGGT TTCTGCTCCA CATGCTCGAG TTTGTGCCGT CCGAAGACCA TCGGCGCCTG
GCGTTCGATG TGCTTGAAGG ATCGCTGGAG TATGGCTGGG ATCGGGAGTA TGGCGGGTTG
TACTACTTTA TGGACATCGA AGGCAAGCCG ACGCTTCAGC TCGAGTCAAC GATGAAGTTG
TGGTGGCCCC ACACGGAGGC GATCTATGCC CTGACGCTGG CATATACGCT GACCGGCGAG
GAACGCTGGA TGCGCTGGCT GGAACGAGTG GACAACTATG CGTTTCGCAC GTTTGTCGAT
CCCGTAGAGG GGGAATGGTT CGGCTATTGC GACCGGCGCG GCGATCTGGC GTTGACCAGC
AAGGGAGGCA ATTACAAAGG GTTCTTCCAT GTGCCGCGCG CGCTACTCTT CAGTGTGCAA
CGCATTGAAG GCGCGTCCTT CGCGCAGCAC CGTCCATAA
|
|---|
| Protein sequence | MLASYAARYR AHLEESVIPF WLQHSLDHEY GGQFTCLDRD GSIYDTKKYM WLQGRAVWMF
SRLYNEFDHR QEFLDAATLI CRFMRRYGRD PQGRVYFSLT REGEPYFYQR KPYAAVFYML
GLLEYARATG DQECLNEAIE VFWQIDRWIR NPALLDRPAL TGNPPVSSLA NVMVLASMAI
ELARVSDDLR YVQVIRDAMD GVVRHYDPQR RILIEHVALD RRDLRAWPEG RLFSPGHSIE
VAWFLLHMLE FVPSEDHRRL AFDVLEGSLE YGWDREYGGL YYFMDIEGKP TLQLESTMKL
WWPHTEAIYA LTLAYTLTGE ERWMRWLERV DNYAFRTFVD PVEGEWFGYC DRRGDLALTS
KGGNYKGFFH VPRALLFSVQ RIEGASFAQH RP
|
|---|
| |