| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3781 |
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| Symbol | |
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| ID | 5541283 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 4953057 |
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| End bp | 4954052 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640895891 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001433838 |
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| Protein GI | 156743709 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.852232 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.126897 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTGCATTA AATGGGCGAA TGGTATGCTC AACACTATTC ATCTGCAAAC ATTCCTTGCC
GTGGTAGAAA CCGGCAGTTA CAGCGCCGCA GCCGAACGCC TCCATCTGTC GCAACCGGCA
GTCAGCAGTC ACATCCGGGC GCTTGAAGCC CAACTCGATC AGGTGCGGCT GTTTCGGCGA
GTCGGACAAC AGATGCTGCC AACACAGGCC GGCGAAGAAC TGATTGCCAT GGCGCGCGAG
ATGCTGGAAC TGGCGACGCA AGCCGAAGAG CGCATTCGCA GTTTGCGTGG GCAGTTGAGC
GGACGGGTGG CGATTGGGTG TACTCCTTCC GGCGCTGAAG TCCTGCTAAC CGGAATACTC
CATGCGTTTC GTGAACGCCA TCCGGCTGTC TGTCTTTCCG TCAACGTCGC TTCGGTCGAT
ATTGTGCTGG AACAGTTATC CCGCCAGCAT ATCCATATCG CGTTCATCGA GGAAAAGCAA
AGTTCGCGCC ACTGGGTTGT GCAACTGCTC GGCATCGATC CGCTCGTCCT GATAGCGCCG
CGCGACCACG AACTGGCGCA TCGTGGTCTT ATCCTGCCCG ACGCGCTCCG TCAGGCGCCC
ATTATCATGC CGCGCAGTGG AAGCGCCACT CGTCGCGTGA TCGATGAAGG CTTACAGGCA
GGTGGTCTGG CGCCCGCCGA TGTGCGCGTG GTGCTCGAGA CCGATAGCGC CACCGTTGCG
CTGGAGGCGG TATGCAGCGG CATCGGGTTG GCGTTCGTGC CACAATCATG TGCGCTGCGC
CAGACGAATG TCAGCACCAT CCCTGTCGAA CTGAGTCTGT ACCAGGAATG GTTCGCCCTC
CGTTCACGCG AGCACGCAAT GTCGCGCGCC GTCCAGGAAG CATTCGCATT TCTGACCGGA
GACGATGTAC GCGCCATCCT GCACCGGGTC GGCGTCCGGT CTCCGCTGGA GAGCAAGGCG
CTGGGAAAGG CGCCGAAAAT GGAAAGGAAA CGATGA
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| Protein sequence | MCIKWANGML NTIHLQTFLA VVETGSYSAA AERLHLSQPA VSSHIRALEA QLDQVRLFRR
VGQQMLPTQA GEELIAMARE MLELATQAEE RIRSLRGQLS GRVAIGCTPS GAEVLLTGIL
HAFRERHPAV CLSVNVASVD IVLEQLSRQH IHIAFIEEKQ SSRHWVVQLL GIDPLVLIAP
RDHELAHRGL ILPDALRQAP IIMPRSGSAT RRVIDEGLQA GGLAPADVRV VLETDSATVA
LEAVCSGIGL AFVPQSCALR QTNVSTIPVE LSLYQEWFAL RSREHAMSRA VQEAFAFLTG
DDVRAILHRV GVRSPLESKA LGKAPKMERK R
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