Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_3778 |
Symbol | |
ID | 5541280 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 4950319 |
End bp | 4950996 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640895888 |
Product | CBS domain-containing protein |
Protein accession | YP_001433835 |
Protein GI | 156743706 |
COG category | [R] General function prediction only |
COG ID | [COG0517] FOG: CBS domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.857066 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.425445 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAATC AACGAGTCGC GGACTGGATG AGCACTCCTG CAATTGTCAT TGCTCCGACA ACGACGCTTG CTGAGGCGCA ACGCCTGATG GAACAGCGGC GCATTCGCCG GTTGCCGGTG GTGGAAAATG GCAAACTGAT AGGAATTATC ACGCGCGGCG ATCTACGCGC TGCCCAACCA GCCGACACAA CGCTCAGCTA CTATGAGTGG CGTGCATTGC TCGATCGGGT CACGGTGGTC GAGTGCATGA CACGCCACGT CGTGACCATC ACGCCGGACG CATCGGCGCT CGATGCCGCT CGATTGATGT TGACGTACAA AATTGGCGGA CTGCCGGTTG TCGATGATGA GGGACGGGTG ATTGGCATAA TCACGGAGAG CGATCTTTTC CGACTACAGA TCGCCCTGGC AACAGGCGGC GAGGCGCGTG ACGCTGAGCG CCCTACCCTT ATCTGCCATC ATTGCGGCGC TGTGTTGCGC GGACGGTCGC TCGATACGAT CAGTCGTGAT GATCAGTGCT GGCGTTGTCA CTACCATCTC CATCGTTGCG ATAACTGTCG TTACTTTGAT AGTATCGCCT GCATGCTGGA TCGCCCGGAA CGACACACTG CAATCCCTGG GCGGGATTGT CCCTGCTTTG TCTATCTGGT GACGCAGGAA CAGGGTGCAG AGCGGTAG
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Protein sequence | MKNQRVADWM STPAIVIAPT TTLAEAQRLM EQRRIRRLPV VENGKLIGII TRGDLRAAQP ADTTLSYYEW RALLDRVTVV ECMTRHVVTI TPDASALDAA RLMLTYKIGG LPVVDDEGRV IGIITESDLF RLQIALATGG EARDAERPTL ICHHCGAVLR GRSLDTISRD DQCWRCHYHL HRCDNCRYFD SIACMLDRPE RHTAIPGRDC PCFVYLVTQE QGAER
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