| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3776 |
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| Symbol | |
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| ID | 5541278 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 4948480 |
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| End bp | 4949373 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640895886 |
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| Product | UspA domain-containing protein |
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| Protein accession | YP_001433833 |
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| Protein GI | 156743704 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.226753 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.31919 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGCCGAT CCATCCTGGT GCCGCTCGAT GGCTCGGCGT TCAGTGAGCA TGCGTTGCCA
CTGGCGCTCT CGGTCGCGCG GCGATCAGGC GCGCAACTTT ACCTTGCTCA CGTCCTGTCT
GGACGTGGCG GGCTGGCCGA TATGGCAGAA CGCGCCAGCG CAGCAAGTCG GACGGCCTAC
CTCGAGCGGG TGGCGCAGCA GATCGAGAAA CAATCGGTGC GTGCGCCGAT TATGTCGATC
CTCACCGGAC CTGTCGCCGA GACGCTTCTG GAGCACGCGC GATCTGTCGG GTGCGATCTG
ATCGTGCTCA CAACCCACGG TCGGGGGGCG CTCTCACGGC TCTGGCTCGG TAGCGTCGCC
GATGTGATCG TGCGGCGCTC GCCGGTGCCG GTAATGCTGG TGCGCCCCCA TCAGCCAACC
GTAACCATCG ATACGAAAAC TACCAGGCTT TCGTTGCGCC GTATTCTGAT CCCGCTCGAT
GGTTCTCCTC TGGCAGAAGC AATCATTGAG CACAGTGTTC ATATCGGGCG TATCATGGAC
GCGGAGTATA CGCTGCTGCG AGTCGTCGAT CCCTCCGTCC TCGGTCTGTC GGCTCAGGAT
GAGAATGCCG GCGCCGCGAC GGTGGCGCAA CCGCTCAAGG ATCGCGCACA GGCGTATCTG
GAACGGCAGG CGGAGGAATT GCGCGCGCAG GGGTTGCAGG TCGATGCTGC GGTCATGGTA
GGAGAACCAT CCGCATGTAT TCTCGACTAT GCACGGATGC ATAGCATCGA CCTGATTGCG
ATGGCAACCC ACGGACGTGG CGGGTTTTCC CTCCTGCTCC TCGGCAGCGT CGCCGATAAA
GTCCTGCGCG GGTCATCGCT GCCGCTGTTG TTGTACAGCC CTGGAGTCAA GTGA
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| Protein sequence | MCRSILVPLD GSAFSEHALP LALSVARRSG AQLYLAHVLS GRGGLADMAE RASAASRTAY
LERVAQQIEK QSVRAPIMSI LTGPVAETLL EHARSVGCDL IVLTTHGRGA LSRLWLGSVA
DVIVRRSPVP VMLVRPHQPT VTIDTKTTRL SLRRILIPLD GSPLAEAIIE HSVHIGRIMD
AEYTLLRVVD PSVLGLSAQD ENAGAATVAQ PLKDRAQAYL ERQAEELRAQ GLQVDAAVMV
GEPSACILDY ARMHSIDLIA MATHGRGGFS LLLLGSVADK VLRGSSLPLL LYSPGVK
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