| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3775 |
|---|
| Symbol | |
|---|
| ID | 5541277 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | + |
|---|
| Start bp | 4948015 |
|---|
| End bp | 4948431 |
|---|
| Gene Length | 417 bp |
|---|
| Protein Length | 138 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640895885 |
|---|
| Product | UspA domain-containing protein |
|---|
| Protein accession | YP_001433832 |
|---|
| Protein GI | 156743703 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.309835 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.427023 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTCACA AAATACTCGT CGCTGTGGAT GGTTCGCCAA CGTCGTCGCG GGCAATCGAC
GCAGCCGTCG ATATCGCAAA GCATTACAAC GCAAAATTGT GCCTGCTCCA TGCGTTCCCG
CATGTCTCCG ATCTTCTCGG CACGCCCGAA TACGAGCGTC TGTTGGAAAC ACGGATGCTG
ATAGGCCAGT CGCTGATTGA GGCTGCACGT ACTCAGGTCG GCGATCAGGC GGATGTTGAT
GTACAATTGC TCGAAGGACC GCCAGCGCAG GCGATTCTGC GCGTTGCCGA AGAGGAGAAC
TTCGACCTGA TCGTCATGGG GTCGCGCGGG CATAGTACAC TCGTTGGTCT GCTCCTGGGC
AGTGTGAGCA ATACAGTGGT GCAACGCGCC CACTGCCCGG TATTGGTCGT ACACTAG
|
|---|
| Protein sequence | MFHKILVAVD GSPTSSRAID AAVDIAKHYN AKLCLLHAFP HVSDLLGTPE YERLLETRML
IGQSLIEAAR TQVGDQADVD VQLLEGPPAQ AILRVAEEEN FDLIVMGSRG HSTLVGLLLG
SVSNTVVQRA HCPVLVVH
|
|---|
| |