| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3774 |
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| Symbol | |
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| ID | 5541276 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 4946834 |
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| End bp | 4947787 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640895884 |
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| Product | UspA domain-containing protein |
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| Protein accession | YP_001433831 |
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| Protein GI | 156743702 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.143188 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.471237 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAACCA TAGTTGTACC GCTCGATGGC TCCGAACTGT CAGCCCAGGT GCTGCCATAT
GTTCGGGTGT TGGCGCCGCT GTTGGGGGCG CGGGTCCATC TGCTCCGCGT CGTTCAGGAG
TCGCATCTTA GCAGCGGCGA GTCGTGGGCG CAGGTGCTCA TTTCGGTCTA TGGCGTTCCA
GAGAGCGAAG CGCTGCGCCG CGATTATTAC GATGAATCGA TGGAGGCGCT TCGCCAGCGC
GCGCAGGCGT ACCTCGACGC ACAGGCGAAG GCGCTCGAAG ATGCAGGGAT TGAAGTCGTC
AGCGATGTGC GCTCCGGTTC ACCTGCCGAT GTGATCGTCG AAGTCGCCGC CGGATGCCTC
CCCGGTGCAA TGATCGCAAT GGCCACGCAT GGCTACAGCG GCTTGCGCCG CTGGGCGCTT
GGCAGTGTCG CCGATAAGGT CATTCATGCG ACCGAAGCGC CGGTGCTGCT GGTGCGCGGG
CAAGCGCAGC CGATTGTGCA TCCGCCGCGC CGTATTCTCA TACCGCTCGA TGGCTCCGGG
CTGGCGCGGC AGGCGCTGCC GCTTGCGAGC GAGATTGCGC GCGCCGCACA CGCCGAATTG
ATCCTGCTCC GCGCGGTGGT GCCCATGATC GAGGCATACA TCGGTGCGCC CATGTTGGGT
CGTCCTCTTG CCGAGAATAA CGAAGCGCTT GGCGCGCTGC ACGAGTACGC GCTGAACGAC
CTGAACGCGG AAGCCGCCTC ATTGCGCGCT GAGGTTCCGC GTGTGCTTAC CCATGCGATT
ATCGGGTATC CTGCCGAGGT GATCATCGAC GAAGCGCAGG CGATGGACGT CGACCTGATT
GTGATGGCGA CGCACGGATA TGGCGGGTTG CGGCGCTGGG CGCTCGGCAG CGTGGCGGAT
AAGGTGCTGC ACGCCACGAC GACGCCGCTC ATTCTGGTGC GTGCCGGCGA GTGA
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| Protein sequence | MQTIVVPLDG SELSAQVLPY VRVLAPLLGA RVHLLRVVQE SHLSSGESWA QVLISVYGVP
ESEALRRDYY DESMEALRQR AQAYLDAQAK ALEDAGIEVV SDVRSGSPAD VIVEVAAGCL
PGAMIAMATH GYSGLRRWAL GSVADKVIHA TEAPVLLVRG QAQPIVHPPR RILIPLDGSG
LARQALPLAS EIARAAHAEL ILLRAVVPMI EAYIGAPMLG RPLAENNEAL GALHEYALND
LNAEAASLRA EVPRVLTHAI IGYPAEVIID EAQAMDVDLI VMATHGYGGL RRWALGSVAD
KVLHATTTPL ILVRAGE
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