| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3768 |
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| Symbol | |
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| ID | 5541270 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 4939667 |
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| End bp | 4940389 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640895878 |
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| Product | LrgB family protein |
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| Protein accession | YP_001433825 |
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| Protein GI | 156743696 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1346] Putative effector of murein hydrolase |
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| TIGRFAM ID | [TIGR00659] conserved hypothetical protein TIGR00659 |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.402238 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0658159 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACCAA CCATGACTGA CATCTGGGTC TATCTGGCAC AGACGCCGCT CCTCTGGCTG
ACCGCCACGC TGCTGGTCTA CTACCTGGCG GATCTGGGGT ATCAGCGAGT TCGGCAGTGG
ACCCTGGCAA ATCCGGTTCT TCTTTCGGTT GTCCTGCTGG TCATCTTCCT GACCGTCACC
GGCACACCCT ATCAGCGCTA CTTTGATGGC GCTCAGTTCG TCCATTTCCT GCTGGGTCCG
ACGACTGTCG CGCTGGCATT GCCGCTCTGG CGCTATGCCA GTCGATTGCG GCGCATGCTG
CTACCGCTCA GCGCGGCGCT TCTGGTCGGC TCGCTCACCT CCGTTCTATC GGTAGTCGCC
ATTGGTCGTC TCACCGGTGT ATCGGAGGTC ACGCTGCGTT CCCTGGCGCC CAAATCGGTC
ACCACACCGA TTGCAATGGG CATCTCCGAA CAGATTGGCG GGCTGCCATC GTTGACGGCT
GTGCTGGTGA TCGTCACCGG CATCATTGGC GCAGTCATCG CGCAAGATCT GTTCGACCGT
CTGCGGTTGA ACGATCAGGC GGCGCGTGGT CTGGCAATCG GGGTCGCATC GCATGGGATT
GGCACTGCGC GTGCGTTGCA GATGCACGCC GAAGCTGGCG CGTTTGCAGG ATTGGCGATG
GGGCTGAACG GTGCGCTGAC GGCGCTGCTG ACACCGATAC TGGCGCAGAT TCTGGGTTTG
TAA
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| Protein sequence | MQPTMTDIWV YLAQTPLLWL TATLLVYYLA DLGYQRVRQW TLANPVLLSV VLLVIFLTVT
GTPYQRYFDG AQFVHFLLGP TTVALALPLW RYASRLRRML LPLSAALLVG SLTSVLSVVA
IGRLTGVSEV TLRSLAPKSV TTPIAMGISE QIGGLPSLTA VLVIVTGIIG AVIAQDLFDR
LRLNDQAARG LAIGVASHGI GTARALQMHA EAGAFAGLAM GLNGALTALL TPILAQILGL
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