| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3751 |
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| Symbol | |
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| ID | 5541253 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 4919750 |
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| End bp | 4920970 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640895862 |
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| Product | geranylgeranyl reductase |
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| Protein accession | YP_001433809 |
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| Protein GI | 156743680 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0644] Dehydrogenases (flavoproteins) |
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| TIGRFAM ID | [TIGR02023] geranylgeranyl reductase
[TIGR02032] geranylgeranyl reductase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0101048 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.000524672 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAACCAG TCCTCGTGGT AGGCGCATCG GTGGGAGGCG CGACGGCTGC CGATACGTTG
GCGCGCGCAG GTGTGCCGGT GGTGATGCTC GAACGCGATA CGTCGTATGT GAAGCCGTGT
GGCGGCGCCG TGCCGCCGGT GGCGTTCACC GAGTTCGACT TGCCGGAAAC ATTGATCTCG
CGCAAGGTGC ATCACGCGCT GGTGCATTCA CCGAGTGAAC GGGTCGTTGA AATTGAGGTT
GCCGGCGTCC ATCGCTCCGA TCAGGATTAT ATCGCCATGT GCTGCCGCGA GGAGTTTGAC
TGCTACATTC GTCAGCGTGC CGTGCAACAT GGCGCAACCC TGATCGAAGG TCAACTGATC
GATCTAGCGT TCGATAAGGA GGGTGTGACG GTAACCTACC GCGAGCGGTT CGGCGGTGCG
CGTCAGGAAC TGCGCGCTGT GGCGGTGATC GGTGCTGACG GGGCATACTC GACGACGGCA
AAGCTGCTGG GTTTGCCCAA TCTGCCGCGC TGCATCGCCA TCCAGCAACG TATTCGCCTG
CCTGCCAGCA AAATGGCGCG CTGGGAAGAT ACCGCCGATC TCTACCTGGG TCCTGAGGTC
AGTCCCGATC TGTATGCCTG GGCGTTTCCC AAGAGCGACC ACGTGGCCGT TGGGATCGGA
ACCGGACCGT CGCACAGCAA ACGCGCCCGT GAATTGCTCG CCAATCTGAA GCGTCGGATT
TCCCGCGATC TTGAGGGTGG CGAGGTCATC CTCGAAGAAG CGCATGCGCT GCCGATGGAG
CCGCGTGAGC ATATGGCGTT CGAGCGCGCT ATGCTGATCG GCGATGCGGC GGGTCTGGTG
GTGCATACAT CGGGCGAAGG CATCTATTGG GCGATGAAGA GCGGCAAAAT GGCGGCAGAG
ACGCTGATCG CCAGTCTGCC CGATGCGTCG CTCGCTGCGC TGCGGCGCTA TGAGCGCCGG
TGGTGGAAGA CCTACGGCAC AATGTACCGC TTCCTCGTCT GGCTCCAGAA ATGGGGGTAC
GGGAACGCGC GGCAGATGGA AGTCTTCACC GATATGTGCC GCAATCTGGA TGTGCAACGC
CTGACGTTCG AGTCGTACAT GCACAAGAGT ATGACGCCGG TGCCGTGGCT GGCACAACTG
CGTATGACGG CGGACATTAT CGCTGCGCAG GTGCGTCACT ACCTGCCACG CCGGCGGACG
GGTCAACCGG CAGTCGCTTG A
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| Protein sequence | MEPVLVVGAS VGGATAADTL ARAGVPVVML ERDTSYVKPC GGAVPPVAFT EFDLPETLIS
RKVHHALVHS PSERVVEIEV AGVHRSDQDY IAMCCREEFD CYIRQRAVQH GATLIEGQLI
DLAFDKEGVT VTYRERFGGA RQELRAVAVI GADGAYSTTA KLLGLPNLPR CIAIQQRIRL
PASKMARWED TADLYLGPEV SPDLYAWAFP KSDHVAVGIG TGPSHSKRAR ELLANLKRRI
SRDLEGGEVI LEEAHALPME PREHMAFERA MLIGDAAGLV VHTSGEGIYW AMKSGKMAAE
TLIASLPDAS LAALRRYERR WWKTYGTMYR FLVWLQKWGY GNARQMEVFT DMCRNLDVQR
LTFESYMHKS MTPVPWLAQL RMTADIIAAQ VRHYLPRRRT GQPAVA
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