Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_3734 |
Symbol | |
ID | 5541236 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 4899496 |
End bp | 4901364 |
Gene Length | 1869 bp |
Protein Length | 622 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640895845 |
Product | chaperone protein DnaK |
Protein accession | YP_001433792 |
Protein GI | 156743663 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0443] Molecular chaperone |
TIGRFAM ID | [TIGR02350] chaperone protein DnaK |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.0000000103994 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCGAAGA TCGTAGGCAT CGACCTGGGC ACGACCAACT CGGTCGTTGC GGTGATGGAA GGCGGCGATC CGGTCGTCAT TCCGAACGCC GAAGGCAACC GCACCACGCC GTCGGTTGTG GCGTTCACCA AAAACGGCGA GCGCCTGGTT GGGTTGACGG CGAAGCGTCA GGCGACGATC AATCCTGAGA ATACATTCTA TTCGATCAAG CGTTTTATCG GGCGCAATTT CGACGAAACC ACCGTCGAGC GCGAAATGGT GCCGTTCAAA GTCGTGAAAG GACCGCGCAA CGACGTGCGC GTCTATGCGC CGACCACCGG CAAAGAGTAT GCGCCGCAGG AAATTTCGGC GATGGTGTTG CAGAAACTCA AGACCGACGC CGAAGCCTAC CTGGGTGAGC CGGTGACAAA GGCGGTCATT ACGGTTCCGG CATACTTCAA CGACAGTCAG CGCCAGGCGA CGAAAGACGC CGGCAAGATC GCGGGGCTTG AGGTGCTGCG CATCATCAAC GAGCCAACTG CCGCCGCGCT GGCGTATGGT CTCGATAAGA AGAAGGACGA GACGATCCTG GTGTTCGATC TTGGCGGCGG CACGTTCGAC GTGTCGGTGC TCGAAGTCGG CGATGGCGTG GTCGAAGTCA AAGCCACCAA CGGCGACACA CACCTCGGCG GCGACGACTA CGACCAGCGG ATCGTCAACT GGTTGATCGA CGAGTTCCGC AAGGATCAGG GGATCGACCT GAGCAAGGAT CGCCAGGCGT TGCAGCGCCT GAAGGAAGCC GCTGAAAAGG CGAAGATCGA ACTGTCGAGC ATGTCGGAGA CGGAGATCAA CCTGCCGTTT ATCACGGCGG ACGCCAGCGG TCCGAAGCAT TTGCAAATGC GCCTCAGCCG CGCAAAGTTC GAGCAGTTGA CTGCCGACCT GACCGAGCGC CTGAAGGGTC CGTTCTTCCA GGCGTTGAAG GACGCCGGTC TAAAGCCGAA CGACCTCGAT GAAGTCGTGC TGGTGGGTGG TTCGACCCGT ATGCCGGTGG TCATCGACCT GGTGCGCAAA CTGACGGGCA AGGAGCCGAA CCGCAGCGTC AACCCGGACG AGGTTGTGGC GATTGGCGCA GCGATCCAGG CAGGTGTGCT CGGCGGCGAC GTGAAGGACG TGGTGTTGCT CGACGTGACG CCGCTCTCGC TCGGCGTCGA GACGCTCGGC GGCGTGATGA CGAAACTGAT CGAGCGCAAC ACGACCATTC CGACCCGCAA GAGTGAGATC TTCTCGACGG CTGCTGACGG GCAGACGGCG GTGGACATCC ACATCTTGCA GGGCGAGCGC GAAATGGCCG CCGACAATAT GACGCTGGGG CGCTTCCGGC TCGAAGGCAT TCCGCCTGCG CCGCGCGGCG TGCCGCAGAT TGAAGTGACC TTCGACATCG ACGCCAACGG CATCCTGAAC GTGTCCGCCC GTGATAAGGC GACCGGCAAG GAGCAGCGGA TCACGATTAC GGCCAGCACG AACCTGTCGA AGGAAGAGAT CGAGCGGATG GTTCGCGATG CCGAACTGCA CGCTGCCGAG GACAAGCGGC GGCGCGAACT GGTCGAACTT AAGAACCAGT CCGACAGCCT GGCATACCAG AGCGAGAAGT CGCTGAACGA ACTCGGCGAT AAAGTCGATC CGGCGCTCAA GAGCCGCATC GAAGGTCTGA TCAAGGACCT GCGCGAGGCG ATCAGCCAGG AGAATGAGAG CCGTATGCGG TCAATCTCGG CGGAGTTGCA ACAGGCGATG TACCAGGTGT CGCAGAGCGC TTACACCGGC GGCAACGGCG ACGGCGCGCG CAAAGGCAAG GACGAAGGGG TCGTCGAGGG CGAGTATACC GTCGAGTGA
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Protein sequence | MSKIVGIDLG TTNSVVAVME GGDPVVIPNA EGNRTTPSVV AFTKNGERLV GLTAKRQATI NPENTFYSIK RFIGRNFDET TVEREMVPFK VVKGPRNDVR VYAPTTGKEY APQEISAMVL QKLKTDAEAY LGEPVTKAVI TVPAYFNDSQ RQATKDAGKI AGLEVLRIIN EPTAAALAYG LDKKKDETIL VFDLGGGTFD VSVLEVGDGV VEVKATNGDT HLGGDDYDQR IVNWLIDEFR KDQGIDLSKD RQALQRLKEA AEKAKIELSS MSETEINLPF ITADASGPKH LQMRLSRAKF EQLTADLTER LKGPFFQALK DAGLKPNDLD EVVLVGGSTR MPVVIDLVRK LTGKEPNRSV NPDEVVAIGA AIQAGVLGGD VKDVVLLDVT PLSLGVETLG GVMTKLIERN TTIPTRKSEI FSTAADGQTA VDIHILQGER EMAADNMTLG RFRLEGIPPA PRGVPQIEVT FDIDANGILN VSARDKATGK EQRITITAST NLSKEEIERM VRDAELHAAE DKRRRELVEL KNQSDSLAYQ SEKSLNELGD KVDPALKSRI EGLIKDLREA ISQENESRMR SISAELQQAM YQVSQSAYTG GNGDGARKGK DEGVVEGEYT VE
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