| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3730 |
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| Symbol | |
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| ID | 5541232 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 4886663 |
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| End bp | 4887346 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640895841 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_001433788 |
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| Protein GI | 156743659 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00146021 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTGCTCT CTGTCATTAT TCCGTGCTAC AACGAATCGG CGACGCTGCG CGCCATTCTG
GAGAAGGTGC GCGCCGTCGA TCTTGACAAG GAAATTATCG CTGTTGACGA TCATTCCAGT
GACGATACGT ATCGCATTCT GTGCGAGGAA GCCGCGCGTG ATCCGTCGAT GACGGTCATT
CGCCATCCGC ACAATCGCGG CAAGGGCGCT GCCGTGCGCA GCGGTCTGGC GCGCGCCCGC
GGCGAGATTG TCATTGTTCA GGACGCCGAC CTGGAGTATG ACCCGAACGA CTACTACGAA
TTGGTGAAGC CGATTGCACA GGGGCGCGTC AATGTGGTGT TTGGCTCGCG GTTCCTGGGG
CGTCATACCG GTATGTACTT CTGGAACGCC CTTGGAAACA AGGGGTTGAC GTTCCTGACC
AATTTTCTGT TCAACTGCTG GATTTCGGAC ATGGAAACCT GCTATAAAGC CATGCGCACC
GAGATCATGC GCGACCTGAA ACTGGAGAGC AACGACTTCC GCATTGAGCC GGAGATCACC
GCCAAGGTGC TGAAGCGTGG ACATCGCATT TATGAAGTTC CGGTCTCATA TTTGGGGCGC
ACCTACGAAG AAGGTAAAAA AATGAAGCCC AGCCAGGGCT TTTATGCGAT CCTTGCGCTG
CTGCGCTATC GGTTGTGGGA GTGA
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| Protein sequence | MLLSVIIPCY NESATLRAIL EKVRAVDLDK EIIAVDDHSS DDTYRILCEE AARDPSMTVI
RHPHNRGKGA AVRSGLARAR GEIVIVQDAD LEYDPNDYYE LVKPIAQGRV NVVFGSRFLG
RHTGMYFWNA LGNKGLTFLT NFLFNCWISD METCYKAMRT EIMRDLKLES NDFRIEPEIT
AKVLKRGHRI YEVPVSYLGR TYEEGKKMKP SQGFYAILAL LRYRLWE
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