| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3728 |
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| Symbol | |
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| ID | 5541230 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 4885115 |
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| End bp | 4886278 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640895839 |
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| Product | aminotransferase class I and II |
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| Protein accession | YP_001433786 |
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| Protein GI | 156743657 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00181067 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCCGCC CACGCATTGC CCGGCGCATG GATCGCGTCC CGGCGTCTGG TATTCGCCGC
TTTTTCGACA TCGCTGCTCA GATGCCCGAC GTGATTTCGC TTGGCGTCGG CGAACCCGAC
TTTGTCACTC CAGCGCCGAT CCGCGCCGCC GGCATCCGCT CGCTCGAAGA GGGGCGCACC
GGCTACACCT CCAATTCTGG GTTGCTAGAG TTGCGCACTG CGCTCTCCGA TCATCTGTAT
GCGCGCTATG GCGTGCGCTA CGATCCGGAA ACCGAACTTC TCATCACGGT CGGCGTCAGC
GAGGCGTTGC AGATTGCCGC TCTCGCCACG CTGAACCCCG GCGATGAGGT CATTATTCCT
GAACCCTGTT TTGTCGCCTA CCCGGCCGCC GTTATCTTCG CCGATGCCGA GCCGGTGTTT
GTGCCAACCA CAGTCGAGCA TTCTTTCCAG GTCGATCCAG AGCGGATCGC CACCGCTATC
ACGCCCCGCA CCCGCGCTCT TTTGCTGGGC TATCCCAACA ATCCGACCGG CGCAGTCATG
CCGCGCGAGC GCCTGACCGC CATCGCCGAA CTCGCCGAAC GCCACGATCT GCTGGTATTC
TCCGACGAAA TTTACGACCG CCTGGTCTAT GGCGTGCAGC ATACCTGCTT CGCGGCGCTG
CCAGGCGCGC GCGAGCGCAC CATCCTGCTC GGCGGCTTCT CAAAGGCGTA TGCTATGACC
GGCTGGCGTC TCGGCTGGAT GGCGGCGCCG TCGGACATCG TCGCGGCGGT GCGCAAAGTC
CACCAATATG CTATTATGTC TGCGCCGACG GTGGCGCAGT ACGCCGGGAT CGAGGCGCTG
CGCAACGGTG AACCGTTCAT TGCCGACATG GTCGCTGAGT ACGACCGTCG CCGCCGGGTG
ATTGTTGCCG GGCTGAACGC GATTGGTCTG CCGACATTCG AACCGCAGGG GGCGTTCTAC
GTTTTTCCAC AGGTGGCGCA CCTCGGTATG AGCAGCGAGG TCTTTGCCGA ACGGCTGCTG
CGCGAGCAGC AGGTCGCCGT CATACCCGGC GACACGTTCG GTCCGAGCGG CGCGGGGTTT
GTGCGCGCCT GCTATGCGGC ATCAATGGAG AAGATCGAGG CTGCGCTCGA CCGTATCGAG
CATTTTGTGC GTGCATGGAC GTAA
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| Protein sequence | MTRPRIARRM DRVPASGIRR FFDIAAQMPD VISLGVGEPD FVTPAPIRAA GIRSLEEGRT
GYTSNSGLLE LRTALSDHLY ARYGVRYDPE TELLITVGVS EALQIAALAT LNPGDEVIIP
EPCFVAYPAA VIFADAEPVF VPTTVEHSFQ VDPERIATAI TPRTRALLLG YPNNPTGAVM
PRERLTAIAE LAERHDLLVF SDEIYDRLVY GVQHTCFAAL PGARERTILL GGFSKAYAMT
GWRLGWMAAP SDIVAAVRKV HQYAIMSAPT VAQYAGIEAL RNGEPFIADM VAEYDRRRRV
IVAGLNAIGL PTFEPQGAFY VFPQVAHLGM SSEVFAERLL REQQVAVIPG DTFGPSGAGF
VRACYAASME KIEAALDRIE HFVRAWT
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