| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3727 |
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| Symbol | |
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| ID | 5541229 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 4884326 |
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| End bp | 4885102 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640895838 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001433785 |
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| Protein GI | 156743656 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.358068 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00171141 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAATCGC TCGCAGGTCA GGTCGTCGTC ATTACCGGGG CATCAGGCGG GTTCGGCGCG
TTGATCGCCC GGCGTTGCGT CGCCGCAGGA GCGCGCGTGG CGCTGGCAGC GCGCACGATG
ACCGCACTCG AGCGCCTGGT AGAGACGTCT GGCGGTCCCA CCCGCGCCAT CGCCGTCGCC
ACCGATGTCG CCAATCCCGA TGATGTTGCG CGCCTGGCGC GCACCACGCT CGACCATTTC
GGTCACGTCG ATGTGCTGGT GAACAATGCG GGCTTTGGCA TCTTCGACCG GCTGGCGGAC
GCGCGCCTGG AAGACGTTCG GGCGATGATG GAGGTGAATG TCTTCGGCGC GCTGGCGTGT
ACGCAGGCAT TTCTACCGCA CATGCTCGCC CGGCGCAGTG GTCAGATTGT GATGATGGCG
TCGATGGCGG GGCTGGTGGC GGCGCCGAAT ATGGGGGGCT ATACGGCGAC CAAGCACGCG
CTCGTCGGTC TCAGCCGCAC CCTGATGCTC GAACTCGAAG GCACAGGCGT GCGTTGCGCC
ATGATCTGCC CCGGCGTCGC CGAAACCGGG TTTCAGCACC GCGCCGGCGC CGAGAAGTAC
CCGCGCATTG CCCGCCTCTC AACATGCACT GCCGATCAGG TCGCCGATGC GACGCTGCGC
GCAATCGCGC GGCGCACGCA TGGCGAAATC GTGGTGCCCT GGTATGGACG GTTGCTCGCG
CTGATCAGTT ATCCGCTGCC CGGCGCCACC CGCGCCGTGA TGCGGCTCAT TGGATAA
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| Protein sequence | MESLAGQVVV ITGASGGFGA LIARRCVAAG ARVALAARTM TALERLVETS GGPTRAIAVA
TDVANPDDVA RLARTTLDHF GHVDVLVNNA GFGIFDRLAD ARLEDVRAMM EVNVFGALAC
TQAFLPHMLA RRSGQIVMMA SMAGLVAAPN MGGYTATKHA LVGLSRTLML ELEGTGVRCA
MICPGVAETG FQHRAGAEKY PRIARLSTCT ADQVADATLR AIARRTHGEI VVPWYGRLLA
LISYPLPGAT RAVMRLIG
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