Gene Rcas_3725 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_3725 
Symbol 
ID5541227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp4882882 
End bp4883487 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content57% 
IMG OID640895836 
Productsuperoxide dismutase 
Protein accessionYP_001433783 
Protein GI156743654 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0605] Superoxide dismutase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.166476 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00168961 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCTTTCA CACTTCCGCC GTTGCCGTAT GATTTCTCTG CGCTGGAACC GAACATCGAC 
ACCATGACCA TGCAGATCCA CCACGGCAAG CATCATCAGG CGTATGTGAC GAACCTGAAT
GCGGCGCTCG AGGGTCATTC CTCGTTGCAG CATGCGACCA TTGAAGAGAT TCTGATGAAC
ATCAACGATG TGCCCGAAAG CATTCGGCAG GCGGTCATCA ACAATGGCGG CGGGCATCAC
AATCATACGC TGTTCTGGAC CATCATGGGA CCCAATGGCG GCGGCGAGCC GCGCGGCGAG
CTGGCAAAGG CGATCAACGA CGCCTTCGGC AGCTTTGCCG AGTTCAAGGC GAAGATTAAG
GATGCGGGCG TCAAACGTTT CGGCAGCGGG TGGGCATGGC TGGTGAAGGA TAAGGAAGGC
AAACTCCACA TTTACAGCAC CGCCAACCAG GATAGCCCGC TCATGCAAGG GCATATGCCA
ATTCTGGGAG TTGATGTATG GGAGCACGCC TATTATCTGA AGTACCAGAA TCGCCGCCCC
GACTACATCG ACGCCTGGTG GAATACGGTC AACTGGGATG CGGTGGCGGA GCGCTTCGGG
CAGTAA
 
Protein sequence
MAFTLPPLPY DFSALEPNID TMTMQIHHGK HHQAYVTNLN AALEGHSSLQ HATIEEILMN 
INDVPESIRQ AVINNGGGHH NHTLFWTIMG PNGGGEPRGE LAKAINDAFG SFAEFKAKIK
DAGVKRFGSG WAWLVKDKEG KLHIYSTANQ DSPLMQGHMP ILGVDVWEHA YYLKYQNRRP
DYIDAWWNTV NWDAVAERFG Q