Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_3725 |
Symbol | |
ID | 5541227 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 4882882 |
End bp | 4883487 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640895836 |
Product | superoxide dismutase |
Protein accession | YP_001433783 |
Protein GI | 156743654 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0605] Superoxide dismutase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.166476 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.00168961 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGCTTTCA CACTTCCGCC GTTGCCGTAT GATTTCTCTG CGCTGGAACC GAACATCGAC ACCATGACCA TGCAGATCCA CCACGGCAAG CATCATCAGG CGTATGTGAC GAACCTGAAT GCGGCGCTCG AGGGTCATTC CTCGTTGCAG CATGCGACCA TTGAAGAGAT TCTGATGAAC ATCAACGATG TGCCCGAAAG CATTCGGCAG GCGGTCATCA ACAATGGCGG CGGGCATCAC AATCATACGC TGTTCTGGAC CATCATGGGA CCCAATGGCG GCGGCGAGCC GCGCGGCGAG CTGGCAAAGG CGATCAACGA CGCCTTCGGC AGCTTTGCCG AGTTCAAGGC GAAGATTAAG GATGCGGGCG TCAAACGTTT CGGCAGCGGG TGGGCATGGC TGGTGAAGGA TAAGGAAGGC AAACTCCACA TTTACAGCAC CGCCAACCAG GATAGCCCGC TCATGCAAGG GCATATGCCA ATTCTGGGAG TTGATGTATG GGAGCACGCC TATTATCTGA AGTACCAGAA TCGCCGCCCC GACTACATCG ACGCCTGGTG GAATACGGTC AACTGGGATG CGGTGGCGGA GCGCTTCGGG CAGTAA
|
Protein sequence | MAFTLPPLPY DFSALEPNID TMTMQIHHGK HHQAYVTNLN AALEGHSSLQ HATIEEILMN INDVPESIRQ AVINNGGGHH NHTLFWTIMG PNGGGEPRGE LAKAINDAFG SFAEFKAKIK DAGVKRFGSG WAWLVKDKEG KLHIYSTANQ DSPLMQGHMP ILGVDVWEHA YYLKYQNRRP DYIDAWWNTV NWDAVAERFG Q
|
| |