Gene Rcas_3719 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_3719 
Symbol 
ID5541221 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp4877488 
End bp4877835 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content62% 
IMG OID640895830 
Producthypothetical protein 
Protein accessionYP_001433777 
Protein GI156743648 
COG category[S] Function unknown 
COG ID[COG3870] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00413752 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAACTGA TCATCGCCGT TGTGCAACGG CAGGATGCCG GGGACCTGAT CGAGGCGCTG 
ACGGCGGCCG GCCATCGGGT GACTCGCATC AGCAGCGAGG GCGGATTTCT GCGCGAAGGG
AATGTGACTC TCCTGATTGC TGCCGAGGAT TATCAGGTGG ACCCGATTCT GAAGATTGTG
CGTGAACACT GTTATACGCG GACGCGGTAT GTGTCGCCGT TGCCGCCGGT TGCGGAGTCG
GGCGAGTTCT ATCCGCCAAC GCCGGTGGAG GTGCAGGTTG GTGGCGCGAC CGTTTTTGTC
TTGCGCGCTG CTGACGTGCG TCGCCTGACG CCATCAGAGC CTCGCTGA
 
Protein sequence
MKLIIAVVQR QDAGDLIEAL TAAGHRVTRI SSEGGFLREG NVTLLIAAED YQVDPILKIV 
REHCYTRTRY VSPLPPVAES GEFYPPTPVE VQVGGATVFV LRAADVRRLT PSEPR