Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_3716 |
Symbol | |
ID | 5541218 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 4875108 |
End bp | 4876097 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640895827 |
Product | peptidase S58 DmpA |
Protein accession | YP_001433774 |
Protein GI | 156743645 |
COG category | [E] Amino acid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3191] L-aminopeptidase/D-esterase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00511947 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGTCCTT CGATAACCGA TGTTTCGGGT GTTCTGGTGG GGCACGCACA GGACGGTGCA GCGTTGACCG GGTGTACAGT TGTGCTCGCG CCCGAAGGGG CGGTCGGTGC AGTGGATGTT CGTGGCGGCG CTCCAGGGAC GCGCGAGACC GATCTGCTCG CGCCGGTTGC AACCGTCGAT ATGGTGCATG CCGTGGCACT GTGTGGCGGG AGCGCCTTCG GTCTGGCGGC AGCCACCGGT GTGGTGCAGT GGCTCTCTGA ACAGGGAATT GGTTTCCCGA CCGGGGTTCG TCCGGTGCCA ATCGTGCCGG CTGCCGTGAT CTTCGATCTT GCGATTGGCG ACGCAGATCG TTTCCCCGAT GCTGCGATGG GGTATGCGGC GTGTAGCGCT GCCGGCGCGT CGGTGAGCGA GGGATGTGTC GGCGCAGGCA TTGGCGCGAC GGTAGGGAAA ATTCGTGGCA TGCAGTACGC GATGAAATCC GGCGTCGGTA CGTGGAGCGA ACGCCTGGTG GATGGCGTGG TCGTGGGTGC GCTGGCGGTT TGCAATGCGT TTGGCGATGT GTACGATGAG CGGAGTGGTC GTCTGCTGGC GGGGGCGCGC GCTGACGATG GTTCGTTCGT CGATGCAATG GCGCTGCTAC GTGGCGCAGG TCCGGCGTTG CTGTGGTCGG CGGCATCGGA AGGGCAGAAT ACCACCCTGG CGGTGATTGC GACCGATGCG CGTCTGACGA AAGCGGAAGC GACGAAGGTG GCGCAGATGG CGCAGGATGC GCTGGCGCGA ACAATTCGCC CGGTGCATAC GCCGTTCGAT GGCGATACCG TCTTTGTGCT CGCTACCGGG AGGCGCGCGT CACCGGGGGT GTTGCCGCTT GGCGCCATCG CTGCCGAGGT TCTGGCGCGC GCCATTGAAC GCAGTGTGAC GCAGGCGTGG TCGCTCGGCG GTGTGCCTGG GATGAGGCGA GACGCGGGAG GCGAGAGGCG AGAGGGGTGA
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Protein sequence | MSPSITDVSG VLVGHAQDGA ALTGCTVVLA PEGAVGAVDV RGGAPGTRET DLLAPVATVD MVHAVALCGG SAFGLAAATG VVQWLSEQGI GFPTGVRPVP IVPAAVIFDL AIGDADRFPD AAMGYAACSA AGASVSEGCV GAGIGATVGK IRGMQYAMKS GVGTWSERLV DGVVVGALAV CNAFGDVYDE RSGRLLAGAR ADDGSFVDAM ALLRGAGPAL LWSAASEGQN TTLAVIATDA RLTKAEATKV AQMAQDALAR TIRPVHTPFD GDTVFVLATG RRASPGVLPL GAIAAEVLAR AIERSVTQAW SLGGVPGMRR DAGGERREG
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