| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3709 |
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| Symbol | |
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| ID | 5541211 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 4861499 |
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| End bp | 4862458 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640895820 |
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| Product | hypothetical protein |
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| Protein accession | YP_001433767 |
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| Protein GI | 156743638 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2013] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00266] conserved hypothetical protein TIGR00266 |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0906247 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000000182656 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAATGCC CGACCTGCGG CGCGGTGTTG TCTCCAAGCG CAAAGTTTTG TTCCCGTTGT
GGCACGCGCG TGGCGGCGCC GCCGGATGCG CCGCCGCCAA TGGCGCCACC GGCAGCGACC
GGCGAGTCGT ATGTCTATGG CAATCAGATG GGGCAGCGTC TGGACCTCCC CGATCCGGTG
GTGACGGCGC GCGGGCGTGG CGTCACCGGG ATGGAGTATC AGATTGTCGG CACAACTCTT
CAGGCGGTGA TCCTCGAACT CGACCCCGGC GAAACGGTCT ACTCCGAGTC GGGCGCGATG
TCGTGGATGT CGGGCAATAT CCAGATGGCG ACCAATACGC GCGGCGGCGG GCTTGGCGGG
ATGTTCAAGC GCGCCATCTC CGGCGAAAGC CTGTTCCTCA ATGAGTTCAC CTCGGTCGGC
GGCAAGGGCA TCGTCGCCTT CGCATCCGAC TTCCCCGGCA AGATTGTGCC GGCGCCGCTG
CGCGAAGGGC AGACGATGAT CGTCCAGAAA CAGGCGTTCC TCTGCGCCGA GAAGACCGTG
GGACTCGACA TTCACTTCCG CAAGCGCATG GGGGCGGGGT TCTTCGGCGG CGAAGGGTTC
ATTATGCAGA AGTTGACCGG TCCGGGAGTG GCGTTCGTCT GTCTGGACGG CGAGATCGTC
GAGTACACGC TGGATGCGGG GCAGGTGCTG AAGGTGGACA CCGGGCACGT GGCGATGTAC
GAGCCGACGG TCGAGTTCGA CATCGAGATG GTGAAAGGGT TCAAGAACAT TCTGCTTGGC
GGCGAAGGGC TGTTCCTGAC GACGCTGCGC GGTCCGGGGC GCGTCTGGTT GCAGACCATG
CCAACGACGA ACCTGGCGAA GGCGGTTGCC GGGTGCCTGC CAACGGGTGG GAGCAGCCGA
AGTAGTAGTA GTAGCGGCGA TGTGTTGGGC GATGTGATCG GCGGGTTGCT CGACCGATGA
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| Protein sequence | MQCPTCGAVL SPSAKFCSRC GTRVAAPPDA PPPMAPPAAT GESYVYGNQM GQRLDLPDPV
VTARGRGVTG MEYQIVGTTL QAVILELDPG ETVYSESGAM SWMSGNIQMA TNTRGGGLGG
MFKRAISGES LFLNEFTSVG GKGIVAFASD FPGKIVPAPL REGQTMIVQK QAFLCAEKTV
GLDIHFRKRM GAGFFGGEGF IMQKLTGPGV AFVCLDGEIV EYTLDAGQVL KVDTGHVAMY
EPTVEFDIEM VKGFKNILLG GEGLFLTTLR GPGRVWLQTM PTTNLAKAVA GCLPTGGSSR
SSSSSGDVLG DVIGGLLDR
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