Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_3706 |
Symbol | |
ID | 5541208 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 4859124 |
End bp | 4859483 |
Gene Length | 360 bp |
Protein Length | 119 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640895817 |
Product | hypothetical protein |
Protein accession | YP_001433764 |
Protein GI | 156743635 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000772559 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000000130225 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACGAAGC ATGATCTCAG TTTCACGCTC GACTTTCCAA ACGATGAGCG TGAGTCCTTA CCGGCGCTTC TCCGCGCTGC GGGCGCTGAA GTTCAGCGCG AACCCACCAG AGACATCGAC TGGCAGACGG TCGTGGTTGT GATCGACGAG ATCGGCAGGG TAGCGACCGG CGTGACCGCT GCCATCGTGC TCGCCGAGAA GATTGCCGAG AAACTGAACG CCTGGCGCGC GACGATGCGC CGTCAGGGAA AGACTCCGCG CGCCGTGCTG CGCCGTCCCG GGCAACCGCC ACTCGATCTT TCCACTGCAA CCGATCAAGA GGTGCTGGCA TGGCTGCTCA AAACATCGCC GCGCCCGTGA
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Protein sequence | MTKHDLSFTL DFPNDERESL PALLRAAGAE VQREPTRDID WQTVVVVIDE IGRVATGVTA AIVLAEKIAE KLNAWRATMR RQGKTPRAVL RRPGQPPLDL STATDQEVLA WLLKTSPRP
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