Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_3704 |
Symbol | |
ID | 5541206 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 4854278 |
End bp | 4854784 |
Gene Length | 507 bp |
Protein Length | 168 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640895815 |
Product | hypothetical protein |
Protein accession | YP_001433762 |
Protein GI | 156743633 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.140282 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000000146723 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGGAACCG TGACTCTGCT GTCGAACAGC CGAAATGTAC CGAATCAGTT GACCATCAAT GACCAGGAAG CGCATCGGGG CGGCGAAGGA AGCATCTTCT TCACCACCGA TGGCCGTTAT GTGGTCAAGA TCTATCATCA CCCCAGTTCT GACAAACAAA AGCTGCTCCA GCACGTCCTT GACCTAGGGC GGAACTTGGG CGAGGATGAG CAGTTCCTGG CTTGGCCGCT GGGCATTGGA GATCGGTTCA ACGGCCAGTC CAACGTGGGC GTGGTCCGCC GTGTGCCTGC TTCACATGTT CCTCTCTACA AGCTGATCTA CAGCCCAAGA GATGCCGTAG AGCAATTCCG CCAAGGGCGA AGTTGGCTGG AGTACCTCAA GATTGCCCGG GGTACGGCCG CGGCGGTACG CACCATTCAC GGCAAGGGGA TGGCCCACGC TGATATTCAC TTCAAGAACG TTCTGACCAA TTCAATAACC GAAAAGCCCC AAAAACGCTA TCCCTGA
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Protein sequence | MGTVTLLSNS RNVPNQLTIN DQEAHRGGEG SIFFTTDGRY VVKIYHHPSS DKQKLLQHVL DLGRNLGEDE QFLAWPLGIG DRFNGQSNVG VVRRVPASHV PLYKLIYSPR DAVEQFRQGR SWLEYLKIAR GTAAAVRTIH GKGMAHADIH FKNVLTNSIT EKPQKRYP
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