Gene Rcas_3704 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_3704 
Symbol 
ID5541206 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp4854278 
End bp4854784 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content56% 
IMG OID640895815 
Producthypothetical protein 
Protein accessionYP_001433762 
Protein GI156743633 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.140282 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000146723 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGAACCG TGACTCTGCT GTCGAACAGC CGAAATGTAC CGAATCAGTT GACCATCAAT 
GACCAGGAAG CGCATCGGGG CGGCGAAGGA AGCATCTTCT TCACCACCGA TGGCCGTTAT
GTGGTCAAGA TCTATCATCA CCCCAGTTCT GACAAACAAA AGCTGCTCCA GCACGTCCTT
GACCTAGGGC GGAACTTGGG CGAGGATGAG CAGTTCCTGG CTTGGCCGCT GGGCATTGGA
GATCGGTTCA ACGGCCAGTC CAACGTGGGC GTGGTCCGCC GTGTGCCTGC TTCACATGTT
CCTCTCTACA AGCTGATCTA CAGCCCAAGA GATGCCGTAG AGCAATTCCG CCAAGGGCGA
AGTTGGCTGG AGTACCTCAA GATTGCCCGG GGTACGGCCG CGGCGGTACG CACCATTCAC
GGCAAGGGGA TGGCCCACGC TGATATTCAC TTCAAGAACG TTCTGACCAA TTCAATAACC
GAAAAGCCCC AAAAACGCTA TCCCTGA
 
Protein sequence
MGTVTLLSNS RNVPNQLTIN DQEAHRGGEG SIFFTTDGRY VVKIYHHPSS DKQKLLQHVL 
DLGRNLGEDE QFLAWPLGIG DRFNGQSNVG VVRRVPASHV PLYKLIYSPR DAVEQFRQGR
SWLEYLKIAR GTAAAVRTIH GKGMAHADIH FKNVLTNSIT EKPQKRYP