Gene Rcas_3702 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_3702 
Symbol 
ID5541204 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp4840692 
End bp4841318 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content57% 
IMG OID640895813 
Producthypothetical protein 
Protein accessionYP_001433760 
Protein GI156743631 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000000809832 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGCTGCTT TTTACCGCCG CAATCTACCG CACATCCATC CCAGCCATGC GACCTTCTTT 
ATCACCTTTC GGCTGGCGGG CTCGCTGCCG CCGGAGATCA TCGAACGTCT GCGGGAGGAA
TTCCAGGCAG AGGAACGGCG GCTGCAACAA ACCCTGAGCG GCGCGGCACT GCTGAGCGAA
CGATACAAAA TCCAAAAGAA ATTCTTTGGA CGCTACGATG CATGGCTGGA TCAGATGGCG
CACGGCCCGA CCTGGCTGCG TCAGCCGGAA ATTGCCCAAC TCGTTGCGGA CGAGATTCGG
CGCCTGGATG GCGCGCACTA TGACCTGTGG GCCTATTGCA TCATGCCCAA CCACGTTCAC
CTGCTGGTGA ATATGGCACG TTTTGGTGAC GTTGATACCA GAGGGCATCC TTCCGCACTG
AGCCGGGCCT TGCATCTGCT CAAAGGACGC ACGGCGCGCT ACGCCAACCG CTTGCTGGGT
CGCAGCGGAA AATTCTGGCA GGACGAAAGT TACGATCATG TCGTCCGTGA CGAGGCGGAA
TTGCAGCGTA TTCTCCAGTA CATCGTCAAC AATCCTGTCA GGCAGGTCTT GTTGCCGATT
GGCAAGACTG GCCCTATACG TTTGTAG
 
Protein sequence
MAAFYRRNLP HIHPSHATFF ITFRLAGSLP PEIIERLREE FQAEERRLQQ TLSGAALLSE 
RYKIQKKFFG RYDAWLDQMA HGPTWLRQPE IAQLVADEIR RLDGAHYDLW AYCIMPNHVH
LLVNMARFGD VDTRGHPSAL SRALHLLKGR TARYANRLLG RSGKFWQDES YDHVVRDEAE
LQRILQYIVN NPVRQVLLPI GKTGPIRL