Gene Rcas_3693 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_3693 
Symbol 
ID5541195 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp4830307 
End bp4831305 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content43% 
IMG OID640895808 
ProductDNA methylase N-4/N-6 domain-containing protein 
Protein accessionYP_001433755 
Protein GI156743626 
COG category[L] Replication, recombination and repair 
COG ID[COG0863] DNA modification methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00816735 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000112456 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAAGTT CTCTTTCTGA GATCAAAGAA CCATCTGCTG AATACGCGCG AAATAGAGAG 
ATTCCAACTT TTTTTGGACA ACAAATGCTC AAGGGGACTA TTTTTGATAT TAATGAATCT
CAAATAGACT CTAACACGCC CACGTTGTTC TATTCCCATC CTCACGGAGA AATATGGATT
GGTGATACTA TCGCTTGGCT TCGCTCTCTG GAAACCGAAT CGGTTGATAT GATTTTCGCG
GACCCACCCT ATAACATCAG GAAGGCAGAA TGGGATACTT TTGAATCTCA AGAAGAGTAT
GTTGAATGGT CATTGTTGTG GATACGGGAA GCAGCGAGAG TACTAAAGCC TGATGGTACT
CTGTATATTT GTGGATTTTC TGAAATAATC GCCGACTTAA AATTGCCAGC CTCTCGGTTT
TTCAAAGGAT GTCGTTGGCT CATCTGGCAC TATAAGAACA AAGCCAATCT TGGTTCGGAT
TGGGGGCGTT CCCATGAAAG CATTCTTCAC TTCAGGAAGA GCAAGAATTT TACTTTCAAC
ATTGATGATG TACGCATTCC TTATGGCAAC CATACCCTCA AGTATCCTGA GCATCCACAA
GCTGAGACCA GTCAATATGG AAAAGGCAAT GGAAGAAAAA ATAGTATATG GCAACCACAC
CCACGTGGTG CCAAGCCCAG GGATGTTATC GAAATACCTA CGACTTGTAA TGGAATGCAC
GAAAAAACAC CTCACCCAAC GCAGAAACCA GAAGAACTTT TGCGTAAGTT GGTCCTAGCC
TCGTCGAATG TTGGAGATTT GATTGTAGAT CCGTTTCTTG GCTCTGGAAC TACCGCTGTT
GTTGCTGAAC AGCTTCGACG CAATTGGAAA GGTTGTGATA TTTCTCTAGA ATATTGCCGA
TGGACTGTCA GGCGTATTGA GTTGGTGGAA GATTGGCCAA TAGAGAAGTG GATTCAATAT
GATTTTGAAA ATGCCGAGAG AAGGAAATCT ATTCGATGA
 
Protein sequence
MKSSLSEIKE PSAEYARNRE IPTFFGQQML KGTIFDINES QIDSNTPTLF YSHPHGEIWI 
GDTIAWLRSL ETESVDMIFA DPPYNIRKAE WDTFESQEEY VEWSLLWIRE AARVLKPDGT
LYICGFSEII ADLKLPASRF FKGCRWLIWH YKNKANLGSD WGRSHESILH FRKSKNFTFN
IDDVRIPYGN HTLKYPEHPQ AETSQYGKGN GRKNSIWQPH PRGAKPRDVI EIPTTCNGMH
EKTPHPTQKP EELLRKLVLA SSNVGDLIVD PFLGSGTTAV VAEQLRRNWK GCDISLEYCR
WTVRRIELVE DWPIEKWIQY DFENAERRKS IR