Gene Rcas_3690 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_3690 
Symbol 
ID5541192 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp4828883 
End bp4829320 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content50% 
IMG OID640895806 
Producthypothetical protein 
Protein accessionYP_001433753 
Protein GI156743624 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.273172 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000000573032 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGATAAAT CACGCCGCCT AACAAGCGTT TCCAGCCGAC CCGCTCCGCT TCGCTTCGCT 
CCGCTACGCG GGCGGCTGAA ACGCAAACCG TTGGGCTGCT TCGCCAAAAT AACGAAAGGG
CTAGTAATGA AATCGGACCT CATTGTGCCA ATCTATGTTG ATACAAATGC TCTCCTCAAC
CTGCTGGCAT CTATTGAGGG TGGCTTCAGC ATTGTCGAGA AAGTAACAAC TTGCAGGATA
ACCAGCACTG GTTATGAGAA GTTAGCCTCA GGGGAAGCAG GTGCAGAGTT CGGGGTTCCA
AATGTGCTTA ACTTGCTCAA GGTGAAACTT GGTGGTTCTC TGAGTTCAAA GAAACAGCAA
GAGACTGGGG AGGAAAAAAG AAGCCGAACG GCGCCATACT TACGGATCTC TGCTGTTTCG
CCTTCGTGCC TTTCTTGA
 
Protein sequence
MDKSRRLTSV SSRPAPLRFA PLRGRLKRKP LGCFAKITKG LVMKSDLIVP IYVDTNALLN 
LLASIEGGFS IVEKVTTCRI TSTGYEKLAS GEAGAEFGVP NVLNLLKVKL GGSLSSKKQQ
ETGEEKRSRT APYLRISAVS PSCLS