Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_3690 |
Symbol | |
ID | 5541192 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 4828883 |
End bp | 4829320 |
Gene Length | 438 bp |
Protein Length | 145 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640895806 |
Product | hypothetical protein |
Protein accession | YP_001433753 |
Protein GI | 156743624 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.273172 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.00000000573032 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGATAAAT CACGCCGCCT AACAAGCGTT TCCAGCCGAC CCGCTCCGCT TCGCTTCGCT CCGCTACGCG GGCGGCTGAA ACGCAAACCG TTGGGCTGCT TCGCCAAAAT AACGAAAGGG CTAGTAATGA AATCGGACCT CATTGTGCCA ATCTATGTTG ATACAAATGC TCTCCTCAAC CTGCTGGCAT CTATTGAGGG TGGCTTCAGC ATTGTCGAGA AAGTAACAAC TTGCAGGATA ACCAGCACTG GTTATGAGAA GTTAGCCTCA GGGGAAGCAG GTGCAGAGTT CGGGGTTCCA AATGTGCTTA ACTTGCTCAA GGTGAAACTT GGTGGTTCTC TGAGTTCAAA GAAACAGCAA GAGACTGGGG AGGAAAAAAG AAGCCGAACG GCGCCATACT TACGGATCTC TGCTGTTTCG CCTTCGTGCC TTTCTTGA
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Protein sequence | MDKSRRLTSV SSRPAPLRFA PLRGRLKRKP LGCFAKITKG LVMKSDLIVP IYVDTNALLN LLASIEGGFS IVEKVTTCRI TSTGYEKLAS GEAGAEFGVP NVLNLLKVKL GGSLSSKKQQ ETGEEKRSRT APYLRISAVS PSCLS
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