| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3689 |
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| Symbol | |
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| ID | 5541191 |
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| Type | |
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| Is gene spliced | No |
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| Is pseudo gene | Yes |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 4826386 |
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| End bp | 4828890 |
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| Gene Length | 2505 bp |
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| Protein Length | |
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| Translation table | |
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| GC content | 43% |
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| IMG OID | 640744537 |
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| Product | |
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| Protein accession | |
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| Protein GI | |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.847919 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.0000000193713 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGAAACCA AAAGCCTGCT GGTAGAGCCT GTACAGCGCG ACAATCTTCT TGAGCGAGTA
GACTTTCTGC GCCTGGAAGC TCATCAGAAA TTAACAGCGG ATCGGACAGA AAAAGGGCAA
TTTTTTACTC CTCAGAAGAT AGCACAATTT ATGGCTCATA TGTTTGCCGA AAGACCCAGC
ATACTGAAAA TCCTTGATGC AGGTGCTGGT ATTGGCTCGT TATCAGCGGC TCTTGTTCTT
GAAGCCTGTC AATGGAATCC AAAGCCTTCG GCTATCACAA TAACCGCCTA TGAAATTGAC
CCAACCCTGA CAGAGTATCT ACACGTAACA CTCGGCTATT GTAAAGAAGT ATGCCACCAA
GAAGAGATTC GTTTTGAATA TGAAGTTATA CAAGACGATT TTATTAGAGC CGCGGTAGAT
GTCTTGAATG GGAGTACCCT CTTCTCTTTA CCCAAGTCTT TTAATGCCGC TATTCTTAAT
CCGCCGTATA AGAAGATAAA TTCTGCCTCT ATTACACGGC GTCTTCTGCG AAAAGTAGGG
GTCGAGACCA CTAATTTGTA TTCGGCCTTT CTTTGGCTGA CAATCAGGTT GCTAGAGCCT
AATGGAGAAC TTGTTGCAAT TACGCCAAGA AGCTTTTGTA ATGGCCCCTA TTTTCTCCCG
TTTAGGGAAG TGTTTCTAAG AACGATGTCT ATAAATCGTA TCCACGTTTT TGACTATAGG
GATCGAGCTT TTGAAGATGA CGACGTTCTA CAAGAAAACG TAATTCTTCA CGCGATAAAA
GCACACCAGC AAGAGCGAGT AACAATTTCA TCAAGCGCCG ACCCAAATGA CCCATTCATA
ACTGTTCGTG AAGTCGAGTA TGCTCAACTT GTTTATCCCG ATGATCCAAA CGTATTCATA
CACATCGTTC CAGATGGACT TGGACAGAGA ATTGGGCAGA AAGCTCGTAG CCTCTCGACC
TCACTTGATG AGTTGGGTAT TACAGTTTCT ACTGGCAAAG TTGTTGATTT TCGCGCTGCT
GATTTCTTGA AAGAAAAACC AGACTCGGAG ACAGTTCCAC TGATATACCC AAGCAACTTT
TCGCAAGGCT ATATTGCTTG GCCTAATGGG CAAAATAGAA AACCATCTGC TATAAGATTA
GCCCAAGAAA CCACTAGCTT GCTCGTCCCC TCTGGTTGGT ATGTTTTAGT CAAACGCTTT
TCGGCAAAAG AAGAAAAAAA GCGTGTTGTT GCAGCCATAT ATGATCCCGT CCGTGTAGAT
GCTGGGTTGA TTGGCATTGA AAATCACCTA AATTACTATC ATCAAAACGG GAAAGGGTTA
CCTCCTCTGT TAGCCAAAGG ATTAGCCGCC TTTCTCAATT CAACCATAGT GGACGAATAT
TTCAGGCAAT TCAGTGGACA TACACAAGTA AATGCAACAG ACCTACGTAA CCTCAAGTAC
CCATCACTGC CCCAGTTAAT GGCGATAGGC GATAAGATAG GCGATGAATT TCCCGAACAA
GACGAAATCG ATCAAATAAT CTTAGGGACA CTAGGAATGG ATACTGCAAA TACCGACGTA
AAAGCGAAAA AGAAAATCGA CGAAGCGCTT GATATTCTAC GAGCGCTCCA AGTGCCAAAA
GCACAACTGA ACCAGCGTTC TGCACTAACA TTGTTGGCTT TGCTCGATAT GAAGCCCGAA
ACAGATTGGA GTAATGCCTC AGCACCCTTA CGCGGCATTA CCGAGATGAT GAATTATTTT
CGCGATCACT TCGGAATTTC TTATGCGCCA AATACCCGTG AGACGGTTCG GCGTGATACG
GTTCACCAGT TTGTGCAAAT GGGGCTAGTG ATTGCAAATC CAGATGATAT TAAAAGACCC
GTTAACAGCC CAAAGACAAA GTACCGAGTT GATGCTAGTC TTCTTAAGGT GATTCGCACT
TATGGAACGA TAGATTGGGA TAAGAATCTG AAAGACTATT TGAAGAATGC ACAGAAATTG
TGAAGGTTGC GTGAAAAGGA ACGTGAAATG GCTTTCATAC CAGTAAAGTT ACCAGATGGC
AAAGAAGTCA GAATTACCGC TGGTGGGCAG AATGACTTGA TAAAACGAAT CATTGAAGAG
TTTTGCCCTC GTTTCACTCC TGGTGGCTTG GTTATTTACG TTGGCGATGC AGGCAATAAA
TTCAGAGTAT ACGAGCGAGA TTATCTCAAA CGGTTAGGTA TTATTGTTGA CGAACACAGC
AAGATGCCTG ACGTAGTAGT TTATCTTGAA GCCCAAAATT GGCTTGTACT GATTGAAGCG
GTCACCAGCC ACGGCCCGAT TGACATCAAA CGCCACAATG AACTCAAGGA ATTGTTCAAA
GATAGCAGAG CTCCTTTGGT ATTCGTGACC GCATTTCCAA CGCGAAAGGT GATGATGAAA
TACCTTCAAG AGATTACGTG GGAAACTGAA GTATGGGTAG CTGAAGCACC TAGTCATCTA
ATACATTTCA ACGGTGAACG TTTCCTCGGC CCATACGATG GATAA
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| Protein sequence | |
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