| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3667 |
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| Symbol | |
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| ID | 5541169 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 4795224 |
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| End bp | 4795913 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640895787 |
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| Product | lipopolysaccharide biosynthesis protein |
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| Protein accession | YP_001433734 |
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| Protein GI | 156743605 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3944] Capsular polysaccharide biosynthesis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACTTT CCGATTATCT GGCTGTGCTG CGTCGCCGCT GGTGGATTAT TCTCCTGACG
ACGGTCGTGG CGGTCGCAAG CGCACTGATA TTCAGCCGTC TCCAGGAGCG CGTCTATCGC
TCCGAGGCGA GTTATCTGGT CGTGCCGAAC CGGATCGACA ACGGACTATC GATTGTGTTG
CAGAACAGCA TGAGCAGTTT CCGCGAGATG GCGCTGGCGC GCCCACAGTT GCAGAAGATC
AGTGATGACC TGCAACTCGA CCGGACGCCG GAATGGTTGC TGAAGCGCGT GGCCATCCAG
CCGCGCCCCG ACGAGCGCAA GATGATCGTG CAGGTCGATT ATCCCGACCC GGCGACGGCG
CAACGCCTGG CAGACGCCAT CGGCAACAAC ATGGTTGCGC TGGTCAGCGC GCGCAACAAC
TTTCTCGAAG GAACCGACCG GATCAGTATG ACCGTGCTCG AACCGGCAAC GCCGCCGGTG
CTCCACCGTC CGCAGACGCG CGTCAATATG CTTGCCGGCG CGGTGCTTGG GCTGGTGCTC
GGCATTCTGC TGGCATTCGT GCTCGAAGCC CTCGACGACA CGATCAAAAC GCCAGACGAT
GTCGAACGGC ACGTCCAACT GGCGACGCTG GGGGCAATCC CCGCGACGGG CAGCGATACC
CGGAGCGCAG CGTTACCGGC AAGACGATGA
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| Protein sequence | MQLSDYLAVL RRRWWIILLT TVVAVASALI FSRLQERVYR SEASYLVVPN RIDNGLSIVL
QNSMSSFREM ALARPQLQKI SDDLQLDRTP EWLLKRVAIQ PRPDERKMIV QVDYPDPATA
QRLADAIGNN MVALVSARNN FLEGTDRISM TVLEPATPPV LHRPQTRVNM LAGAVLGLVL
GILLAFVLEA LDDTIKTPDD VERHVQLATL GAIPATGSDT RSAALPARR
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