Gene Rcas_3665 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_3665 
Symbol 
ID5541167 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp4793365 
End bp4794456 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content61% 
IMG OID640895785 
Productglycosyl transferase group 1 
Protein accessionYP_001433732 
Protein GI156743603 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGTTG CGCTCATCCA CGACTATCTC AACCAGTACG GCGGCGCCGA GCGGGTGCTC 
GAAGCGCTGC ACGACCTGTT TCCCGACGCG CCGGTCTTTA CGTCGATCTA TGATCCCGCT
ACGATGCCTG CCGTCTTCCG CACGTGGGAC ATTCGCGCGT CGTGGATGCA ACGCCTTCCT
GCCTGGCGGC GACTATTTCG CGCGTATGTG CTACTATATC CGCTGGCGTT CGAGAGTTTC
GATCTGAGCG CCTACGATGT GTTGATCAGC AGTAGCAGCG CCTTTGCCAA AGGGGTTATC
CCACGACCAG ATGCCCTCCA CATATGTTAC TGTCACACAC CAATGCGCTT TGCCTGGCGC
ACGTCGGACT ATCTTGCCCG CGAAGCGTTC GGCGCGACGC AACGCGCGGC GCTGGCGCTG
CCGCTCGTCC TGCTCCGTAT GTGGGATGTC CTCTCGGCGC AGCGAGTCGA TGCTTTCATC
GCCAACTCGC GGGTTGTCGC ACAGCGCATC TGGCGTTACT ATCGGCGCAA AGCGGCCATC
ATCCCGCCGC CGGTCGATCT CCCTCCGTGG CGTGAAACGC CGCCGGGCGC CTATTTTCTG
GCGGGTGGAC GCCTGATCCC TTACAAGCGG CTCGATCTGG CGGTTCGGGC ATGCACGCGG
CTGCGGCTGC CGCTCAAAAT CTTCGGCGAT GGACGTGATC GCGCGCGCTT GCAGGCAATG
GCAGGACCGA CGATCACATT CCTGGGGCGG GTGAGTGAAG CGGAACGACA AGCCCTCTTC
GCAGGTTGTC GCGCCTTTAT CTTTCCCGGT GAAGAAGATT TTGGCATTGC GCCGCTCGAA
GCCATGGCCG CCGGACGACC GGTGATTGCG TATGCAGCCG GAGGAGCGCT GGAAACAGTT
GTCGAAGGGG TGACCGGACG CTTCTTTCAC CAGCAGACGG TGGAAGATGT GATGGACGCG
ATTGCCGCAA CACTGACGGA ACGCTACGAT GCCTGCGCTA TTCGCCGCCA CGCCGAGCAA
TTCGGACGAG AAACGTTTCT TGAACGGATG CGCCTGCTGA TCGAGGACAT CATAGAGAGA
AGCGAGAGGT GA
 
Protein sequence
MRVALIHDYL NQYGGAERVL EALHDLFPDA PVFTSIYDPA TMPAVFRTWD IRASWMQRLP 
AWRRLFRAYV LLYPLAFESF DLSAYDVLIS SSSAFAKGVI PRPDALHICY CHTPMRFAWR
TSDYLAREAF GATQRAALAL PLVLLRMWDV LSAQRVDAFI ANSRVVAQRI WRYYRRKAAI
IPPPVDLPPW RETPPGAYFL AGGRLIPYKR LDLAVRACTR LRLPLKIFGD GRDRARLQAM
AGPTITFLGR VSEAERQALF AGCRAFIFPG EEDFGIAPLE AMAAGRPVIA YAAGGALETV
VEGVTGRFFH QQTVEDVMDA IAATLTERYD ACAIRRHAEQ FGRETFLERM RLLIEDIIER
SER